Halomonas sp. TD01: HPTD01_3320
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Entry
HPTD01_3320 CDS
T08977
Name
(GenBank) Uracil-DNA glycosylase, family 1 (EC
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hbp
Halomonas sp. TD01
Pathway
hbp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPTD01_3320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbp03400
]
HPTD01_3320
Enzymes [BR:
hbp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPTD01_3320
DNA repair and recombination proteins [BR:
hbp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPTD01_3320
Prokaryotic type
HPTD01_3320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF294
Motif
Other DBs
NCBI-ProteinID:
CAH1044842
UniProt:
A0AA35E4D6
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All DBs
Position
HaloTd01MainCirc:complement(3568311..3568994)
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AA seq
227 aa
AA seq
DB search
MANPLPDDWNQWLGQEFQADYMSALKTFLAQEKSAKKVIYPHSSHWFRAFELTPLASVKI
VILGQDPYHGPNQAHGLCFSVQPGIQVPPSLVNIYKELAADVGFTPVRHGFLESWATQGV
LLLNTALTVEQGNAASHRGKGWEHFTDCAIDTVSRHAEPCVFLLWGSHARQKKVLIDQSR
HLVLESPHPSPLSAHRGFFGNHHFSRANQFLTEHGRSPIEWQLPETS
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggctaacccgctacccgacgattggaatcaatggcttgggcaagagtttcaggctgac
tatatgtcagccctgaaaacatttttggcccaagaaaaatcagccaagaaagttatctac
ccgcactcatcacattggtttcgcgcttttgagctgacgcctttagcctctgtgaaaatc
gttattctagggcaagacccttatcacggcccaaaccaagctcacgggttgtgcttctcg
gtacagccgggtattcaagtgcctccctcgttggtcaatatttataaagaattagctgct
gatgtggggtttacacctgtgcgacacggctttttggaatcgtgggcaacacagggtgtg
ctgctgcttaacaccgcattaacggttgagcagggtaatgccgcttcacaccgtggtaag
gggtgggaacactttactgattgcgcgattgataccgtcagtcggcatgctgagccgtgc
gttttcttgttgtggggcagtcatgcgcgccagaaaaaagtcctgattgatcagtcacgc
catttggtgttggaatccccgcatccttcgccactctctgcacatcgaggtttttttggt
aatcaccacttttcccgggccaatcagtttttaacagagcatgggcgctctccgattgag
tggcaattgccggaaacctcttaa
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