Halomonas sp. TD01: HPTD01_3723
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Entry
HPTD01_3723 CDS
T08977
Name
(GenBank) Ribonuclease D (EC
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hbp
Halomonas sp. TD01
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbp03016
]
HPTD01_3723
Enzymes [BR:
hbp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HPTD01_3723
Transfer RNA biogenesis [BR:
hbp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HPTD01_3723
BRITE hierarchy
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
CAH1045245
UniProt:
A0AA35E591
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All DBs
Position
HaloTd01MainCirc:complement(4009789..4010898)
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AA seq
369 aa
AA seq
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MYQWIDSADALDAACEQVAGARVIALDTEFFRENTFFPVPALIQFTTGDMAYLVDPLSTP
CTASFRDLLQNSAIKLLHACSEDLEVFQHWAGVLPTPLIDTQVAQAFLGETPGMGYQKLV
EHWMGETLPKEETRSNWLERPLTLSQCEYAALDVIYLLKVWGFQAEKLEQLGRREWLNDE
CASLIEQAGRSVESDGQWYTRQRQLWRLNPRQLEAYRLMTIWREGETRHRDLPRNWLVSD
KLLFAVAEKMPKNRYELAEIEGVKPPLVKKEGDTLLALVKQAQHCPEDDLPERWPDPMHP
AFKRRFKALKKVVTEKAAELQIAPEMLLRRRDIEALVMQRLANQPLTTPGGWRHTYLAQE
IHQALEELS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaatggattgatagtgccgacgccttagatgctgcttgcgagcaagtcgccggt
gcccgtgtgattgccctagacactgaatttttccgtgaaaacacgttttttccagtacct
gcgcttattcagttcacgaccggtgacatggcgtatttagttgatccgttgagcacacct
tgcactgcttcttttcgtgatttgttgcaaaatagtgccatcaaactacttcatgcctgc
agcgaagacctcgaggttttccagcattgggccggcgtattgccaacgccgcttatagat
acacaagtggcgcaggctttcttgggtgaaacaccgggcatgggctatcaaaaactggta
gagcactggatgggggaaacgctgcctaaagaggagacgcgctccaactggttagagcgc
cccttaacgctctcccaatgtgaatatgcggcgttagatgttatctatttgctgaaagtt
tggggttttcaagcggaaaagcttgagcaactggggcggcgtgaatggcttaacgatgag
tgcgccagccttatcgagcaggcaggccgcagtgtcgagagcgacggccaatggtataca
cgccagcggcagttgtggcgccttaacccccgtcaacttgaagcctaccgtttaatgact
atttggcgtgaaggcgaaacccgccaccgggatttgccgcgtaattggttggtcagcgat
aagttactgttcgcggtggcagaaaaaatgcctaaaaatcgttatgagctagcagagatt
gaaggggtcaagccgccgctggttaaaaaagaaggcgacacgttgctggcgctggtgaag
caggctcagcattgccccgaagatgatctgcctgagcgctggccagacccgatgcaccca
gcgtttaagcggcgttttaaagcactgaaaaaagtagtgactgagaaggcggctgagctg
caaatagcgcccgagatgttactacggcgtcgagatattgaggcgcttgtgatgcagcgg
ctcgctaatcagccattaaccactcctggcggttggcgccatacttacttagctcaagaa
attcatcaggcgcttgaggagttatcgtaa
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