Halomonas sp. TD01: HPTD01_3726
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Entry
HPTD01_3726 CDS
T08977
Name
(GenBank) DNA polymerase III subunits gamma and tau (EC
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hbp
Halomonas sp. TD01
Pathway
hbp03030
DNA replication
hbp03430
Mismatch repair
hbp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPTD01_3726
03430 Mismatch repair
HPTD01_3726
03440 Homologous recombination
HPTD01_3726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hbp03032
]
HPTD01_3726
03400 DNA repair and recombination proteins [BR:
hbp03400
]
HPTD01_3726
Enzymes [BR:
hbp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPTD01_3726
DNA replication proteins [BR:
hbp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPTD01_3726
DNA repair and recombination proteins [BR:
hbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPTD01_3726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_16
Trypan_PARP
AAA_14
AAA_5
AAA_18
AAA_30
AAA_2
AAA_19
Mg_chelatase
nSTAND3
AAA_28
AAA_24
TsaE
Rad17
NTPase_1
Herpes_Helicase
HTH_39
SKI
Motif
Other DBs
NCBI-ProteinID:
CAH1045248
UniProt:
A0AA35E551
LinkDB
All DBs
Position
HaloTd01MainCirc:complement(4011963..4014020)
Genome browser
AA seq
685 aa
AA seq
DB search
MSYQVLARKWRPRTFHELVGQAHVQRALVNALDQGRLHHAYLFTGTRGVGKTTLARILAK
CLNCTANGRGDEGITSTPCGQCDSCRAIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYA
PTQGRYKVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPATVLSRCLQFT
LKHMPPERVVEHLTYVLGEEGVAYDESALWLLGKAAEGSMRDAMSLTDQAIAFGQGAIRH
ADVAAMLGTLDHRHVLALVEALADVDVQRLLAEVAQLSEQGPDFAAVLDELSAVLHRLAV
AQMVPDAVDNSHGDRALIQQLASRFTAEDIQLYYQIGIQGRGDMVHAPDLRSALEMTLLR
MLAFRPQGVPKPAATPLPLRRESPSNAASQEAVPHEPNSHEPVSHEPVSHESISQVSASD
NSSVSESASAHEPTTKKPEPALPSNQVEAPDSAAVQASVEPVTNEASSALDASLEQQAPP
WSLDEVESAAMLSPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPVSADVP
VNVASRQGASGDRLDHAGWLACFSALGLGGLTRNLAAHCQLESDDGHTVVLRLDPGQSAM
QADVHNGRIERALSSYGLPRRIEFTVADLASDIETPRQQEERQQQERHSLAVDLLHRDPN
IQKLQQAFGATLIESTVKPTSDKRS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttctggcccgcaaatggcggccgcgtacattccacgagctcgtgggc
caggcccatgttcagcgcgccttggtcaatgccctcgaccaaggccgtttacaccatgcc
tacctatttacgggtacccgaggcgtgggcaagaccacgcttgcgcgtatccttgccaaa
tgccttaactgcaccgcaaatggccgtggtgatgaaggtatcacctcgacgccttgcggt
cagtgcgacagctgtcgcgcgattgacgaagggcgtttcgttgacttgatcgaggttgat
gccgcttcgcgtaccaaggttgaagatacccgtgagctgctcgataacgtgcagtacgcg
cctacgcaagggcgctataaggtgtacctgattgacgaggtgcacatgttgtcgaccagt
agttttaatgcgctgcttaaaacgttggaagagccgccgccccacgtgaaatttctgttg
gccaccacagatccgcagaaattgcctgccaccgtactatcccgctgtctgcaattcacg
cttaagcatatgccccctgagcgggtggtagagcacctaacctatgtactgggtgaggaa
ggtgttgcgtatgatgagagcgctttgtggctgttaggtaaggccgcggaaggttctatg
cgtgatgcgatgagcctgaccgatcaagccattgcctttggccaaggtgcgattcgccat
gcagatgtcgctgccatgctcggtaccttggaccatcgccacgtgttggcgctggtagaa
gcattggctgatgtggacgttcaacggctgctagccgaggttgcccagctatcggagcag
gggcctgattttgcagcagtactggacgagttaagcgcggttttgcatcgcttggcggtg
gcgcagatggtgcctgatgctgtggataacagccacggtgatcgagcgcttattcaacag
ttagcgagccgttttactgctgaggatattcagctttattatcagattggtatccagggg
cgtggtgatatggtgcacgctcctgatctgcgcagtgcgctggaaatgacgttgctgcgt
atgctggcgtttcgcccccagggagtgccaaagcctgctgccacaccgcttccactgcgc
cgcgaatctcccagtaacgctgcatctcaagaagcggtgcctcatgagcctaactctcat
gaacctgtctctcatgaacctgtctctcatgaatcaatttctcaggtatctgcatctgat
aatagcagcgtgtctgaatcagcctctgctcatgagccaacgacaaaaaagcctgagcct
gcactgccgagcaatcaggtagaagcgcctgactcagccgcagtgcaggcgagtgttgag
ccagtcacgaatgaggcatccagcgcgctagatgcctcattagaacagcaagcaccgccg
tggtcgcttgatgaggtggagagtgcggctatgctctcgccagagccagagccagagcca
gagccagagccagagccagagccagagccagagccagagccagagccagagccagagcca
gagccagagccagagccagagccagagccagagccagagccagtttccgctgatgtgcct
gttaatgttgccagccgccagggtgcttctggcgatcgtctggatcatgctgggtggctg
gcatgcttcagtgcccttgggttaggcggccttacccgcaatttggcagcgcactgtcag
cttgaaagtgatgatggccacacggtggtgctgcgtcttgaccctggccaatccgctatg
caggccgatgttcacaatggccgtattgagcgtgcgctaagtagttatgggctgcctcgg
cgtattgagtttacggtagctgacttagcgtctgatattgaaacgcctcgccagcaggaa
gagcgtcagcagcaagagcgtcactcgttggctgttgatctattacaccgcgaccccaat
atacagaagctgcagcaggcatttggggctactctcattgagtcaaccgttaaacccacg
tctgacaaacgttcttag
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