Halomonas sp. TD01: HPTD01_420
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Entry
HPTD01_420 CDS
T08977
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hbp
Halomonas sp. TD01
Pathway
hbp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HPTD01_420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbp03400
]
HPTD01_420
DNA repair and recombination proteins [BR:
hbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HPTD01_420
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
CAH1041942
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Position
HaloTd01MainCirc:429509..432076
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AA seq
855 aa
AA seq
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MSQASPAHTPMMAQYLKIKRDHPEVLLFYRMGDFYELFFDDAKRAAMLLDITLTQRGQSG
GKPIPMAGVPYHSAEGYLARLVSAGESVAICEQIGDPATSKGPVDRQVVRIVTPGTLHDE
ALLDARRDNVLVAVAPSKDGWGLAWLELSSGRFNVLEVESEAEMQAELTRLSPAELLVPE
SLTLPDAWSQKRSLRRQGEWLFDLDSATRSLCDQFEVQDLRGFGCAHLTTALIAAGVLID
YARDTQRSRLPHVTAISVENRDDAVVIDAASRRNLEIDINLGGSSDNTLASVLDTCTTAM
GSRLLKRWLNRPLRQRDVVEDRHAGVALLSIEAAYLPLRDTLSDVGDVERILARVALYSA
RPRDLARLRDALVTLPALEQLLSEIDNGSALDGLKPHIRPYPEIADTLTRALVENPPVVI
RDGGVIANGFDTELDEHRGMAENAGDYLVQLELRERERTGLANLKVGYNRVHGYFIELPR
SQAQQAPADYIRRQTLKNAERFIIPELKEFEDKALSAKSRALTREKWLYERLMGELNAAL
HALQNTSRALAELDVLCAFAERAEALNWVRPQLSDATGLRISAGRHPVVEHVSDTPFVPN
DVTLTPDQHMLIITGPNMGGKSTYMRQTALIALLAHSGSFVPADSAEIGPVDRIFTRIGS
SDDLAGGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTFDGLSLAWASAEYLAEAK
ALTLFATHYFEMTALPEQAEGVANIHLTATEHGDSIVFMHRIESGPASQSYGLQVAQLAG
VPSHVIRRAREKLMALEQRDVDELQRPSGISAAPQQNDLFASAPHPVVEALGKADVDDLT
PREALALLYQWRELL
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaggccagccccgctcacacgccaatgatggcgcaatatcttaagatcaaacgc
gatcaccctgaggtacttctgttttaccggatgggggatttttacgagctatttttcgat
gatgccaagcgcgctgcaatgctgctggatatcacccttacccagcgcggccagtcaggt
ggtaaacccattcctatggcaggcgtgccctaccatagcgctgaaggctatttagcccga
ctggtaagcgctggtgaatcggtcgccatttgtgaacagataggcgaccccgctaccagt
aaaggtcctgttgaccgtcaagtagtgcgcattgtcacccctggcacgcttcacgatgaa
gcccttctggatgcacgccgcgataacgtattggtcgccgtggcgcctagcaaagacggc
tggggccttgcgtggctggagctttccagtgggcgcttcaatgtcttggaagtagaaagt
gaagccgagatgcaggcagagctaacccgcctgtcgcctgccgaactgttagtacccgaa
agtttgaccctgcccgatgcatggtcgcaaaagcgcagtctgcggcgccaaggagagtgg
ctgtttgacttagatagcgccactcgtagcttgtgcgatcagtttgaagtccaggattta
cgcggctttgggtgcgcacacttaaccaccgcacttatcgctgcgggggtgctgatcgat
tacgcccgagacacccagcgctcacgcctgccccacgtaacggccattagcgtcgaaaac
cgcgacgatgccgtggtgattgacgcggccagtcggcgcaatctggaaattgatattaat
ttgggcggtagcagcgataacacgctggccagtgtgctagacacctgcaccaccgctatg
ggttcgcgattattaaagcgctggcttaaccgcccgctgcgccagcgtgacgtcgtagaa
gatcgtcacgctggcgtggcgctgctctctattgaagcggcctacctcccgctacgcgat
acattgagtgatgtaggcgacgtcgagcgtattttggcccgcgtcgcgctatatagcgcc
cgccccagagacttggcacgcctgcgcgacgccttggtaacactaccggcacttgagcaa
ctgctaagcgaaattgataacggtagcgccctagacggacttaaacctcacattcgcccc
tacccagagatagcagataccttaacccgcgcgctagttgagaacccgccggtggtgatt
cgcgatggtggcgtgattgcaaacggttttgacaccgagctagatgaacaccgcggcatg
gctgaaaatgccggtgattatctagtgcagttggagcttcgcgagcgcgaacgcactggt
ctcgccaatttgaaagtcggttataaccgggttcatggctactttattgaattacctcgc
tctcaagctcagcaagcgcccgcggactatatccgccgacaaacgctaaaaaatgctgaa
cgctttatcattccagagctaaaagagttcgaagacaaagcactctcggccaagtccaga
gccctcactcgtgaaaagtggctctacgagcgcctgatgggcgaactcaacgcggcgctt
cacgcgctgcaaaacacatcgcgggcgttggcggaacttgatgtactctgcgcctttgcc
gagcgcgcagaagcactcaattgggtaaggccccagcttagcgatgccaccggccttaga
atctctgctggacgacaccccgtcgtcgaacacgttagcgacacaccgtttgtacccaac
gatgtcacgctaacacctgatcagcacatgttgattatcaccggtcccaatatgggtggt
aaatcgacctatatgcgccagaccgcgctcatcgcgctgctggctcatagcggtagcttc
gtacctgccgacagcgctgaaataggtcctgtagatcgtatttttactcgtattggctcg
tcagatgacctagcgggtggtcgctctacgtttatggtcgagatgaccgaaaccgctaat
attttgcacaacgctaccgagcatagcttggtattaatggacgaaattggccgtggcacc
agtacttttgacggcctttcgctagcctgggcaagtgctgaatacctagccgaagccaaa
gcactcactctgtttgccactcactattttgaaatgaccgcgctaccggagcaggccgag
ggcgttgcaaacattcacctgacagcaaccgagcacggcgacagcatcgtgtttatgcac
cgcatcgagtctggccctgctagccagagctatggcttacaagtagcccagttggcaggt
gttcccagccatgtgatacgcagagcccgtgaaaaactgatggcgctggagcagcgcgac
gtggatgaactgcagcgcccaagcggaatttccgcagcaccgcaacaaaacgacttgttt
gccagtgcaccgcaccccgtagtggaagcactaggcaaggccgatgtagacgatttaaca
ccccgcgaagcactggcactgctgtatcaatggcgggaactgctgtaa
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