Halomonas sp. TD01: HPTD01_453
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Entry
HPTD01_453 CDS
T08977
Name
(GenBank) Ribonuclease Z (EC
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hbp
Halomonas sp. TD01
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbp03016
]
HPTD01_453
Enzymes [BR:
hbp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
HPTD01_453
Transfer RNA biogenesis [BR:
hbp03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HPTD01_453
Prokaryotic type
HPTD01_453
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
CAH1041975
UniProt:
A0AA35DYW2
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All DBs
Position
HaloTd01MainCirc:complement(470480..471442)
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AA seq
320 aa
AA seq
DB search
MNLLFLGTSAGVPTKTRNVTGIALRESKGKGWYLVDCGEGTQHQVLHTKLSFHSLKAILI
THVHGDHCYGLPGILASAAMGGRKAPLTIVAPASIKTWLEATCEVTQLCLPFALEFIASD
DLPSVEFENIAVETFSLSHRVASYAYAFTERKVDAVLDVAKLAQKGIPRGPLWGQLKQGF
DIEFAGERLKSHDYLIFKNTPRKVVIAGDNDQPDLLNEACAEAQVLVHEATYTEEMAQKA
GDVGHSYAKLVAAFAESIKLPSLVLTHFSPRYQFSSHASPSIEDIRKEAEGAYSGSLFLA
RDFGEYTLEKTGHFSEVVGE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaacctactcttcctcggcacctccgccggtgtacccaccaaaacaagaaatgtcacc
gggatcgctttgcgtgaaagcaaagggaagggctggtatctggttgattgtggtgaaggt
acccagcatcaggtcttgcataccaagctatcgttccattcattgaaagccatcttgatt
acccatgtgcacggcgaccactgctacgggctgccgggtattctggcgagtgcggctatg
ggtggccggaaagcgccactcactattgttgcgcccgcaagtatcaaaacttggttggag
gcaacctgcgaggtgacgcagctatgcctaccttttgccttggagtttatcgcctcagac
gacctgccaagcgttgagtttgagaacatcgcggttgagacattcagcctttcacatcgg
gtggcgtcttatgcctatgcatttacggagcgaaaggttgatgctgtcttggacgtggct
aagctagcgcaaaaggggattccaagagggccgctgtgggggcagttgaagcaggggttt
gatattgagtttgcaggtgagcggttaaaaagccatgactacttaatcttcaagaacacg
cccaggaaagtagtgatcgctggggataacgaccagcctgacttattgaacgaggcgtgt
gcagaggcgcaggtgctggtacatgaggccacctataccgaagagatggcccagaaggcc
ggtgatgtggggcatagctacgccaaacttgttgctgcttttgccgaatcgataaagcta
cctagtttggtgctgacgcacttcagccctcgttatcagttcagctcccatgcgtcgccg
tccatcgaggacattcgcaaagaagctgagggtgcctattcaggctctcttttcttggcg
cgggattttggcgaatacaccttggaaaaaacgggccacttttctgaggtggtgggcgag
tag
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