Halomonas sp. TD01: HPTD01_658
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Entry
HPTD01_658 CDS
T08977
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
hbp
Halomonas sp. TD01
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbp03021
]
HPTD01_658
Transcription machinery [BR:
hbp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HPTD01_658
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
SWC7
Motif
Other DBs
NCBI-ProteinID:
CAH1042180
UniProt:
A0AA35GXL0
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All DBs
Position
HaloTd01MainCirc:complement(689010..689876)
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AA seq
288 aa
AA seq
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MSTSLLPVGQLSPGHDLGGYIQAVNGIPVLSVDEERELAFRLHDEGDLEAARRLVLSHLR
FVVHIARSYSGYGLPQADLIQEGNVGLMKAVKRFDPNQGVRLVSFAVHWIKAEIHEFVLR
NWRIVKIATTKAQRKLFFNLRSAKKRLAWLNNDEVNAIAEDLNVKPEVVRDMEGRLSAYD
AGFDASPSDDEESTYQAPAYFLDDASADPATLLEDSNFEEDSTRRLQLALKGLDERSRDI
LQRRWLTDNKATLHDLADVYGVSAERIRQLEKNAMKKLRQKMGDAIAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagtcttctaccggtgggacagctttctccaggtcacgatctgggcggctat
attcaagcggttaacggcatacccgtattaagcgttgatgaagagcgtgagcttgcattc
cgcctccacgacgaaggtgatttagaagcagcacgccgcttggtgctgtcgcacctgcgt
tttgttgtgcatattgctcgcagttactcaggttatggtctgccacaggctgacctgatt
caagaaggtaacgtcggtctaatgaaggccgttaaacgcttcgaccccaatcagggcgtt
cgcttggtgtcatttgccgtgcattggatcaaagcggaaattcatgagtttgtgctgcgc
aactggcgtattgtcaaaattgccaccacgaaagctcagcgcaagttgttttttaacctg
cgtagcgccaaaaaacgcttagcctggctgaacaacgatgaagttaacgcgattgcggaa
gacctcaacgtaaagccagaagtagtgcgcgatatggaaggccgcctgtcggcttacgat
gcgggcttcgatgcctctcctagcgacgacgaagagagcacctatcaagcaccggcgtat
tttttagatgacgcttccgctgatccggcaacgctgctggaagacagcaactttgaggaa
gattcaacgcgtcgcttacagctagctttgaaagggcttgatgagcgctcgcgggatatt
ctgcagcgtcgctggctcactgataataaagcgacactgcacgacttggccgatgtttat
ggcgtcagcgctgaacgcatccgccagctcgaaaagaacgcaatgaaaaaactgcgccag
aagatgggcgacgctatcgccgcttaa
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