Halomonas sp. TD01: HPTD01_74
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Entry
HPTD01_74 CDS
T08977
Name
(GenBank) Outer membrane porin for chitooligosaccharides ChiP
Organism
hbp
Halomonas sp. TD01
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Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
CAH1041596
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Position
HaloTd01MainCirc:complement(79038..80444)
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AA seq
468 aa
AA seq
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MLISSIFTPQKGQPLGRFGQLALVGTLSLVPLTSSAGEPQGFMEEASLQTTLFYIYRDRD
RRQGGMGPAGEGRPGAYASNLQHSTANLAVDFSSGYAGGVVGLDLAAFAAYDFQNRHQGT
EFNFRPASTLWEERWDGKETNGASLYRAALKLKFGDMWGRLGYLQPQGTSVIAPNWSFLP
GTYRGGELGARIGDLSLSYFHADRYKAPWYQSFYEFRQADGETIDYLHSLGARYEVTDDL
VVEAAFGQAQGYMDQGFGKVSYATQLNDSPLRLSYQAYAARDRHDDGSANDVYDGTAWQQ
VLTAHYGQGAFDWRLEFSWVHAPGAQGYFLPRMTTPYASSNGRMDVWWDARSDWNHDGEK
SLYAGVTYDLEGWRLPGWSLGVAHAYGWDARPYSGFEDPGRRFSESAWNFDVHYKVQNGW
AEGTRFQLHYTRYDNRTDYASWGDGGFKNAFQDEHDIKFTVVAPFSIL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgctgatatcaagcatatttacgccccaaaaagggcagcctttaggtcgctttggtcaa
ctagccttggtcggcaccttatctctggttcctttgacgtcctctgcaggtgagccacag
ggctttatggaagaggccagtcttcagaccactctgttttatatctaccgagatcgtgat
cgtcgtcagggaggtatggggccagctggtgagggccgtccaggggcttacgcttccaac
ctgcagcactctaccgccaatctggccgtcgacttctcgagcggttatgcggggggagtt
gtggggctggatctagccgcctttgccgcctatgactttcagaaccgccaccagggtacg
gagtttaatttccgcccagcgagtacgctctgggaggagcgctgggacggcaaggagacg
aatggcgccagcctttaccgggctgccctcaagttgaaatttggcgatatgtgggggcgg
ctggggtatctgcagcctcaaggcaccagtgtcatcgccccgaactggtctttcctaccg
ggcacttatcgcggtggtgagctcggagccaggataggtgacctgtcgctgagctatttt
catgccgaccgttacaaagccccctggtatcagagcttctacgagttccgccaagctgac
ggagaaacaatcgactacctgcactcgttgggagcgcgctatgaagtcaccgatgatctg
gtagtcgaggcagcgtttgggcaagcccagggttatatggatcaagggttcggtaaggtg
tcttatgccacccagttgaacgattccccgctgcgtttgagttaccaggcctatgccgct
cgtgatcgccatgacgatggctcagccaacgacgtctatgacggcactgcctggcaacag
gtgcttaccgctcactatggtcaaggtgccttcgattggcggcttgagtttagttgggtg
catgcgccgggtgctcagggctacttcctgccgcgaatgaccaccccttatgcatcgtct
aacggccgcatggacgtctggtgggatgcccggtccgactggaatcacgatggcgagaag
tccctctacgccggtgtcacctatgacctggaggggtggcgtttgcccggctggtcgctg
ggcgtggctcatgcgtatggctgggatgcacgtccctactcaggttttgaggaccccggc
cgccgctttagtgagtccgcctggaactttgatgtgcattacaaggttcagaatggctgg
gccgagggcacgcgctttcaactgcactacacccgctacgacaaccgcaccgactacgcc
tcctggggagatggcggttttaaaaacgcctttcaggatgaacacgacatcaagttcaca
gtcgtggcccctttctcgattctgtaa
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