Halomonas sp. TD01: HPTD01_787
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Entry
HPTD01_787 CDS
T08977
Name
(GenBank) Poly(A) polymerase (EC
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hbp
Halomonas sp. TD01
Pathway
hbp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPTD01_787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbp03019
]
HPTD01_787
Enzymes [BR:
hbp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HPTD01_787
Messenger RNA biogenesis [BR:
hbp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HPTD01_787
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CAH1042309
UniProt:
A0AA35DZN5
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All DBs
Position
HaloTd01MainCirc:827670..829055
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AA seq
461 aa
AA seq
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MFKGFTRLLHSPGEHLKSLLDSPESAADALSPRIIPRSEHPVSRQQISEAALKVLYRLNG
AGFDAYLVGGCIRDALLGKMPKDFDVATNATPEQVRDLFRNSRLIGRRFRIVHVRFGREV
IEVTTFRGKPQDEHGDHIAQQSDDGLLLRDNVWGNIEEDALRRDFTVNALYYNIADFTIH
DFANGARDIESRTLRLIGDPVTRYREDPVRMLRAVRFAAKLDFTIEPATEEPMYDLAPLL
LQIPPARLFDEVLKLFMSGHGLITFRLLSHYNLFGMLFPEAEEAMADAAWAEDLIEQALT
NTDKRIAEGRPVTPAFLLAAFLWAPVAHRQAELEREGMPAIPALQTAAQQVVTRQLQHIS
IPKRFGMPMRDIWELQARLPLRRGKRAFQTREHPRFRAAYDLLLLREQAGEIPRGLGDWW
NAFQQGDEHEQLRLLQKVGSDPASQGDRRRKKRRKPRKTEQ
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaggatttacccgtttattacatagcccgggagagcacttgaaatccctgctc
gattccccagagagcgccgctgatgcgctcagtccccgtattattccgcgctccgagcac
cctgtttctcgtcagcaaatcagcgaggccgcgttaaaggtgctctatcgcctcaatggc
gctggatttgatgcctatctagtcggcggctgcattcgtgatgcactgctgggcaaaatg
ccgaaagatttcgacgttgccacaaatgcaacgccggaacaggtgcgggatctgtttcgt
aattcgcggctgattggtcggcgctttcgcatcgtgcatgtgcgctttggccgcgaagtc
attgaagtcaccactttccgtggcaagcctcaggacgagcacggcgatcatatcgcccag
caatctgacgatggtctgctattgcgagacaatgtgtggggcaatatcgaagaagacgcc
ctacgccgcgacttcaccgtgaatgcgctttactacaatatcgctgacttcacgattcat
gacttcgctaatggcgcgcgtgatattgaatcgcgtacgctgcggctaattggcgacccg
gttacccgctatcgggaagacccggtgcgcatgctgcgtgcagtgcgctttgcggccaag
cttgactttaccatcgagccagccaccgaagagccgatgtacgatctagcgccgctgtta
ctgcaaatccctcccgcccgtttgtttgatgaagtgctcaagctattcatgtcggggcac
ggcttaattactttccgcttgctgagtcattacaacttgtttggcatgctgttccccgaa
gcggaagaagccatggcggatgccgcttgggccgaagacctgatcgaacaagcgctcact
aataccgacaagcgcattgcggaaggtcggccagtgacgccagccttcctgctagccgcc
tttttgtgggcaccagtggcgcaccgtcaagcagagcttgagcgagaaggcatgcccgca
attccggcgctacaaactgccgcacaacaggtagtcacacgtcagttacagcatatttcg
attcccaagcgctttggcatgccaatgcgcgatatttgggagctacaggctcgccttcct
ctacgccgtggcaaacgggcatttcaaacccgcgagcatccacgtttccgagccgcctac
gatttgctgctgttacgtgaacaagcaggtgaaattccacgcggcttaggcgattggtgg
aatgcctttcagcaaggtgatgagcacgaacaacttcggctcctacaaaaagtgggaagt
gatcctgcaagtcagggtgatcgtcgccgtaaaaaacgccgcaaaccgcgtaaaacagag
cagtga
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