Halomonas sp. TD01: HPTD01_796
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Entry
HPTD01_796 CDS
T08977
Name
(GenBank) tRNA pseudouridine(55) synthase (EC
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hbp
Halomonas sp. TD01
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbp03016
]
HPTD01_796
Enzymes [BR:
hbp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HPTD01_796
Transfer RNA biogenesis [BR:
hbp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPTD01_796
Prokaryotic type
HPTD01_796
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
CAH1042318
LinkDB
All DBs
Position
HaloTd01MainCirc:complement(837238..838158)
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AA seq
306 aa
AA seq
DB search
MARRRRGLPVNGVLLLDKPKGISSNHALQRVRRLFEAQKAGHTGTLDPMATGLLPICLGE
ATKFSAHLLEADKMYRTRVELGVITDTGDAEGTVIERREIPSLTAEDVESVLARFHGEID
QVPPMYSALKHQGKKLYELAREGKHVERAARRVSVYDARLLAFEGTAFELEVSCSKGTYI
RTLAEDIGHALGCGAHISQLRRLKTGPFTGDAMWTLEDLEALADQATREAELMPADVLVD
HFPSLTVDETAFGRLAHGQSASLAIGALEPDALARLYYAETFIGLGVVKGAQEVAPKRLL
STVAIS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcgccgtcgcggattaccggttaacggtgtactgctgctggataagcctaag
ggcatttccagcaaccatgcgctgcagcgtgtgcgccgtctgtttgaggcgcagaaagcc
ggtcatactggcacgttggaccctatggcaacaggcttgttacctatttgccttggggag
gccactaagttttccgcgcacctgttagaagccgacaagatgtatcgcacccgcgtagag
ctgggggtgatcaccgacaccggcgatgccgaaggcacggtcattgaacggcgcgagatt
cccagcttaacggctgaagatgtcgagtcagtcctagctcgctttcacggcgagattgac
caagtgccgccgatgtattcggcattgaagcatcaaggcaaaaagctttatgagctggcc
cgcgagggtaagcacgttgagcgtgcagcgcggcgagtaagcgtgtatgatgcgcggctg
cttgcgttcgagggcacggccttcgaacttgaagtcagctgtagcaaaggcacgtacatt
cgcaccttggctgaagatattggtcatgcgctgggctgtggtgcccatattagtcagttg
agaaggctcaaaacgggtccctttaccggcgatgcaatgtggacactggaagaccttgaa
gcgctggcagaccaagccacccgcgaggctgaactgatgcctgcagatgtgctggtggat
cattttccgtcgctgacggtagatgaaacggctttcgggcgtcttgcacatggccagtcg
gctagtttagccattggtgcgcttgagcctgacgcgctggcaagactttattacgctgag
acgtttatcggcctcggcgttgtaaaaggggctcaggaagtagctcccaagcgactgtta
agtaccgtcgctatctcgtaa
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