Halotia branconii: QI031_00620
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Entry
QI031_00620 CDS
T09011
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hbq
Halotia branconii
Brite
KEGG Orthology (KO) [BR:
hbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hbq03009
]
QI031_00620 (rimO)
Enzymes [BR:
hbq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QI031_00620 (rimO)
Ribosome biogenesis [BR:
hbq03009
]
Prokaryotic type
ribosomal protein modification factors
QI031_00620 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Mur_ligase_C
CLP1_P
Thioredoxin_6
AHD
Motif
Other DBs
NCBI-ProteinID:
WGV28969
UniProt:
A0AAJ6NY99
LinkDB
All DBs
Position
121824..123143
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AA seq
439 aa
AA seq
DB search
MGEKPTIAISHLGCEKNRIDTEHILGLLVEAGYDVDTNEELADYVIVNTCSFIEAAREES
VRTLVELAEADKKIVITGCMAQHFQEQLLEELPEAVAVVGTGDYHKIVNVIERVQQGERV
KQVSVEPTYIADETTPRYRTTTEGVAYLRIAEGCDYRCAFCIIPYLRGNQRSRTIESIVA
EAKQLASQGVQEIILISQITTNYGLDIYGKPKLAELLRALAKVDVPWIRVHYAYPTGLTL
DVITAFKETPNVLPYLDLPLQHSHPEILRNMNRPWQGRVNNEIIDRIKTALPTAVLRTTF
IVGFPGETQEHFEHLLEFVQRHEFDHVGVFTFSPEQETPAYKLPNQLPQQVMEQRRHRVM
ELQQPISQRKNQQEIGKIVDVLIEQENPESGKLIGRSGRFSPEVDGQIYIEGQAKLGTIV
PVAIHGADIYDLYGQVVNN
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaaagccaacaattgcaatttcccacttgggctgcgaaaaaaaccgaattgat
acagaacacatcttagggctgcttgtagaagcaggttacgatgtagatacaaatgaagag
ttagcagattacgttattgtcaatacatgtagttttattgaagcggcaagagaagaatct
gtcagaactttggtagagttggcagaggcagataaaaaaattgtcatcactggctgtatg
gcccagcacttccaggaacaattattggaagagttgccggaagcagttgctgtggtggga
acaggtgattatcacaaaattgtcaatgtaattgagcgagtacaacagggagaacgggtc
aaacaagttagtgtagaaccaacttacattgctgatgaaacgacaccgcgctaccgcacc
acaacagagggtgttgcctacttgcgaattgctgaaggatgtgattatcgttgtgcattt
tgtattattccttatctacgaggaaaccagcgatcgcgtactattgaatctatagttgcc
gaagccaagcagctagcctcccaaggggtacaagagattattctcatttcccaaatcaca
actaattacggtttggatatttacggtaagccaaagttagccgaactgcttcgcgccttg
gcaaaggtggatgtaccttggattcgagtacattatgcttatcccaccggattaactttg
gatgtgattacagcgttcaaagaaacacctaacgtcttaccttacctggatttgcctctg
caacattctcatccagagattctccgcaatatgaaccgtccttggcaaggacgtgtgaac
aatgagattattgatcgcatcaaaacagcgctaccaacggcagtattgcggacaacattt
atagttggtttccccggagaaactcaagagcattttgagcatctactagagtttgtgcag
cggcatgaatttgaccatgttggtgttttcaccttttcaccagaacaggaaacccctgcc
tataagctacctaatcagttgccacaacaagtgatggagcagcgtcggcacagagttatg
gaactccagcagccaatttcgcaaagaaaaaatcagcaggaaataggcaagattgttgat
gtcctgatagagcaagaaaatcctgaaagtgggaaattaattggtcgttcaggtagattt
tccccagaagtcgatggtcaaatttatatcgaaggtcaggcgaagttaggaaccatcgtg
ccagtagcgatccacggcgctgatatatatgacctatacggtcaagttgtcaataactaa
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