Halotia branconii: QI031_00740
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Entry
QI031_00740 CDS
T09011
Name
(GenBank) ribonuclease R
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
hbq
Halotia branconii
Brite
KEGG Orthology (KO) [BR:
hbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbq03016
]
QI031_00740
Enzymes [BR:
hbq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
QI031_00740
Transfer RNA biogenesis [BR:
hbq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QI031_00740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
WGV26080
UniProt:
A0AAJ6NSU3
LinkDB
All DBs
Position
150140..152200
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AA seq
686 aa
AA seq
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MEKGTLVEFRVQGDRRLGVVERPDGKTRWFVVDERSQSHSLAPRQITYTVNGQAYKTSEI
VSFLEQVKPYLDPSSLEVAWELLVEDGETVTPAEMANLLFSQSDPAPCYAAHCLLSDDKF
YFKQKGDAYEPRTAAQVAERKHQIEVEALKAKGQQEFLARVEQALQGETVEWQRHDRQRL
EGLEKYAALLADVVKIGVNFDSLGRAYPPSTSVLETMTMLGRPATPQGALQLLIDLGWWN
VHENLFLRRSSIPVQFPHKVLEVAQQRLDFPPADLDANRLDLNHLKVYTIDDESTTEIDD
GLSWELLPDGRQRLWVHIADPTRWLMPEDDLDLEARKRGSTVYLPTGMIPMFPEVLATGP
MSLVQGQVCCALSFGVVLDQNGAVEDYCIHPSLIKPTYRLTYEDVDEMLQLGVQAEPEIE
AIANWARQRKSWRYNQGAISINMPEAMIKVKDDNIDIDILDDSSSRQLVAEMMILAGEVA
ARYGQTHNIPLPFRGQPQPELPPEEELLQLPAGFVRACAMRRCMPKSEMSITPVRHAGLG
LDTYTQATSPIRRYSDLLTHFQLKAHLRGEVLPFSAEQLKEVMMSVTSTTQELVMVERQT
NRYWALEYLRRHPEQVWHVTVLMWLREDSNLTLILLEDLGLQLPMMFKRLVRLGEQILVK
VSFADPQKDFIQFQEIIYQEAHTATN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtggagaaggggacgctagttgaatttcgggttcaaggcgatcgccgtctgggtgtagta
gaacgtccagatggcaaaacccgttggtttgtggtagacgaacgcagtcaatcccatagc
ctcgcgccgagacaaattacttatacagttaacggacaagcctacaaaacctctgaaatc
gtcagctttttagagcaggtcaagccttatttagatccatcaagcttagaagtagcctgg
gaattactagtagaagacggggaaacagttacacctgccgaaatggcaaatctgttgttt
tctcaatcagaccctgctccttgttatgccgcacattgcttgttatcagatgataaattc
tatttcaagcaaaaaggagacgcttacgaaccacgaactgcggctcaggtggcagaacgc
aaacaccaaatagaagtagaagctctcaaggcgaagggacagcaggaatttttagctcgt
gtagagcaagccctgcaaggtgaaacggtagaatggcagcgtcacgatcgccagcgctta
gaaggactggaaaaatacgcagcactgttggcggatgttgtgaaaataggagtaaatttt
gactctctaggtcgtgcctatcctccgtcaacctcagtcttagagactatgaccatgcta
ggccgtcctgcaactccccaaggagccttgcaattattgatagacctaggttggtggaat
gtccatgaaaacttgttcttgcgtcgttcgtcaattccggttcagtttcctcacaaggta
ttagaagtggcgcaacagcgtttggattttccaccagctgacttagatgcaaatcgccta
gatttgaatcatttgaaggtttacacaattgatgatgaaagcaccactgaaatcgatgat
ggtctgagttgggaattactccctgatggacgacagcgcttgtgggtacacattgctgat
cctacccggtggttaatgccagaagatgatttagatttagaagcgaggaagcggggaagt
acagtttatttgcctactgggatgattcccatgttccccgaagtattggcaactgggccg
atgagtttagttcaagggcaagtttgttgtgccttgagctttggggttgttctagatcaa
aatggggcagtagaagattattgcattcatcctagtttgattaagccaacttatcgcctc
acctacgaagatgtagatgagatgttgcaattgggtgtacaagcagaaccagaaatagaa
gcgatcgccaattgggcaagacagcgcaaatcttggcgctacaatcaaggagccatcagc
attaatatgccggaggcgatgatcaaagtcaaagacgacaatattgacattgacatttta
gatgattcttcctcgcggcaactagtagcggaaatgatgattttggctggtgaagtagca
gctcgctacggtcaaactcataatatacctctgccatttcggggtcagccgcagccagaa
ttacccccagaagaagaattgcttcagttaccagcagggtttgtgcgtgcttgtgcgatg
cgtcgctgtatgcccaaaagtgaaatgagcattactcccgtgcgtcatgccggtttaggt
ttggatacctatacacaggcaacttctcctattcgccgttatagtgacttactcacccat
tttcaacttaaagcccacttacgaggcgaagttctgccattttcagccgaacaactcaaa
gaagtgatgatgagtgtcaccagcactacccaagaattagtaatggtggaacggcaaact
aatagatattgggctttagagtatctgcgccgccatcctgagcaagtttggcatgtaaca
gtcttaatgtggttgcgggaagacagcaatttgacactaattctgttagaagacttaggc
ttgcaattaccaatgatgttcaaacgtttggtgaggttgggtgaacagatattagtaaaa
gttagctttgccgacccgcaaaaagattttattcaatttcaagaaataatttatcaagaa
gctcatacagctacaaattaa
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