Halotia branconii: QI031_03100
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Entry
QI031_03100 CDS
T09011
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
hbq
Halotia branconii
Brite
KEGG Orthology (KO) [BR:
hbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbq03021
]
QI031_03100
Transcription machinery [BR:
hbq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QI031_03100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_24
HTH_3
KORA
HTH_17
HTH_23
HTH_Tnp_4
Sigma70_ECF
HTH_Tnp_ISL3
HTH_8
GerE
MarR_2
HTH_11
HTH_AsnC-type
HTH_28
Xre-like-HTH
Tri-helical
HTH_31
HTH_30
AbiEi_4
Sigma54_DBD
HTH_38
HVO_A0261_N
Big_10
LacI
Motif
Other DBs
NCBI-ProteinID:
WGV26514
UniProt:
A0AAJ6NU35
LinkDB
All DBs
Position
complement(700797..701576)
Genome browser
AA seq
259 aa
AA seq
DB search
MTTTTATNELKHEIWQLLREYQQYRSETVRNQLVKLNFGLVRKEAHYWMNQCHESYDDLL
QVGCLGLIRAIERFEISKGHAFSSFAMPYIRGEIQHYLRDKGVTVRIPRRYLALQQQAVG
VSRSLREKYNRQPTDSELAEALTISTEEWQEIKLAWINRAPLSLDVPIQDGEEGATSLGE
LVPDPHYRSFQLVQEDQIRLQQALIQLEQRTREVLECVFLQDLTQKQVAEHLGISVVTVS
RRVKKGLDLLKQLMCTGED
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgacgactaccacagcaaccaatgaactaaagcacgaaatttggcagttattgcgagaa
tatcagcaatatcgttcagaaactgttcgcaatcaactggtgaaacttaattttggactt
gtgagaaaagaagctcattactggatgaatcaatgtcatgaaagctatgatgacttactc
caggttggttgtttgggtttaattagagcgattgaaagatttgaaatttctaaaggacat
gccttcagttcctttgctatgccctatattcgcggtgaaattcaacactatttgcgagat
aaaggtgtcacagtgcggattcctaggcgctatttagcgttgcaacagcaagcagttgga
gtttcgcgttcattgcgcgaaaaatataaccgccaacctactgattctgaattagccgaa
gcgctaacaatttctacagaagaatggcaggaaattaaattagcatggattaatcgtgcc
cctttgagcttagatgttcccattcaagatggtgaagaaggagctacaagcttaggagaa
ttggttccagacccccattatcgtagttttcaattggtacaagaagaccaaattcgccta
caacaagcactgattcagttagaacagcgcacccgtgaagttttagaatgtgtattttta
caggatttgacacaaaaacaagtggcagaacacttaggaattagtgtagtcacggtttct
cgtagagttaagaaaggcttagacttattgaagcaactgatgtgtacaggagaagattaa
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integrated database retrieval system
