Halotia branconii: QI031_04410
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Entry
QI031_04410 CDS
T09011
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hbq
Halotia branconii
Pathway
hbq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QI031_04410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbq03019
]
QI031_04410
03400 DNA repair and recombination proteins [BR:
hbq03400
]
QI031_04410
Enzymes [BR:
hbq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QI031_04410
Messenger RNA biogenesis [BR:
hbq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QI031_04410
DNA repair and recombination proteins [BR:
hbq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QI031_04410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
WGV26757
UniProt:
A0AAJ6PAH6
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All DBs
Position
complement(979094..980536)
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AA seq
480 aa
AA seq
DB search
MNHPITPSCNEVRTTFKKIWGYEDFRPPQGEIVNTLLAQKDALIIMPTGGGKSICFQLPA
LLQTGLTLVVSPLVALMENQVQELLQHHQKAALLHSELPSSQRRTTLQALERQQLRLLYL
SPETLLSTPVWERLCHPQLRINGIILDEAHCLVQWGDTFRPAYRRLGAVRPALLKSKPPG
TKISIAAFTATADPLAQKIISTVLQLQQPEVFRLNPYRPNLHTSVRIAWTPRSRKQQLLQ
FIQNRPQQPGLIYVRTRRDSENLAAWLAGMGYDTASYHAGLGATERRAVEANWLGGKIPF
VVCTCAFGMGINKPDVRWVIHFHAPHLLSEYVQEIGRAGRDGKPAQALTLVSEPTGWLDP
EDKQRQEFFQEQMRSQQQIAQQLVKKLPKTGEVNAVTKQFPDGATALALLHSSGQLNWLD
PFHYTITSKIKNQPTTQSQAAKQMHQYLTTKQCRWQFLLHAFGFDREAANWRCGHCDNCH
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatccaataacaccatcttgcaacgaagtccgtactactttcaaaaaaatttgg
ggttacgaagatttccgtccgccacaaggagaaattgtcaatactttattagcccaaaaa
gacgcattaattatcatgccaacaggtggcggcaaatcgatttgttttcaacttcctgca
cttctgcaaacaggattaactttagtagtttcacctttagtagcgctgatggaaaatcaa
gtgcaggaactactccagcatcatcaaaaagctgcacttttacatagtgaattgccatca
tcccaacgtcggacgacattgcaagcgttggaacgacaacaactaagattactttatcta
tcgccagaaactttactaagcacgccagtctgggaaagattatgtcacccacaattgcgt
attaacggcataattttagatgaagctcattgccttgtgcagtggggagatacatttcgg
ccagcttatcgcagattaggggcagtgcgtcctgcattgctcaaatcaaaaccaccagga
acaaaaattagcattgctgcttttactgctacggctgatcctctagctcaaaaaatcatt
tctacagttttacaactacagcaaccggaggtttttcgccttaatccctatcgtcctaat
ctgcataccagcgtccgcatagcttggacaccacggagtagaaaacagcaattacttcaa
tttattcaaaatagaccgcaacagccaggtttgatctatgttcgcacaaggcgagatagt
gaaaatttagccgcatggttagcaggtatgggctatgacacagctagttatcacgctgga
ctgggtgcaacagaacgccgtgcagtagaagctaattggttaggtggtaaaattcccttt
gtagtttgtacctgtgcttttggtatggggattaataaacctgatgttcgctgggtaatt
cattttcacgccccgcatttattgtctgaatatgtgcaagaaatcggacgggctgggagg
gatggaaaaccggctcaagcactgacattggtgagtgaacctacagggtggttagatcca
gaggataaacaaagacaggaattttttcaagagcaaatgcgatcgcaacaacaaatagcg
caacaattagtcaaaaaactaccaaaaacaggagaagttaatgcagtcacaaaacaattt
cctgatggtgctacagcacttgctttactccacagcagcggtcagttaaactggcttgac
ccttttcattacaccatcacatcaaaaatcaaaaatcaaccgacgacgcaatcacaagct
gctaaacaaatgcatcaatatctaactactaagcagtgtcgttggcaatttttattacat
gcttttggttttgaccgagaagctgctaactggcggtgcggacattgtgataattgccat
taa
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