Halotia branconii: QI031_08590
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Entry
QI031_08590 CDS
T09011
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
hbq
Halotia branconii
Pathway
hbq02024
Quorum sensing
hbq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QI031_08590
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QI031_08590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbq03019
]
QI031_08590
03036 Chromosome and associated proteins [BR:
hbq03036
]
QI031_08590
Messenger RNA biogenesis [BR:
hbq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
QI031_08590
Chromosome and associated proteins [BR:
hbq03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
QI031_08590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq_1
Hfq
Motif
Other DBs
NCBI-ProteinID:
WGV27529
UniProt:
A0AAJ6NVJ6
LinkDB
All DBs
Position
complement(1949875..1950093)
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AA seq
72 aa
AA seq
DB search
MHTTEFDTTLPSIRQLQNLIKQAAVIEFKLVTGDLLTGKVAWQDPNCVCIVDENNQQSTI
CKQAIAYFQPKS
NT seq
219 nt
NT seq
+upstream
nt +downstream
nt
atgcacacaactgaatttgatacgacgctacctagcatccggcaattgcaaaacctgatt
aaacaagcagcagtgatagagttcaaactggtaacaggcgatctgctaacaggtaaggtt
gcatggcaagatccaaattgcgtatgtattgtcgatgaaaataatcagcaatccacaatt
tgtaaacaagcgatcgcctacttccagcctaagagttag
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