KEGG   Halotia branconii: QI031_08590
Entry
QI031_08590       CDS       T09011                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
hbq  Halotia branconii
Pathway
hbq02024  Quorum sensing
hbq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hbq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QI031_08590
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    QI031_08590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hbq03019]
    QI031_08590
   03036 Chromosome and associated proteins [BR:hbq03036]
    QI031_08590
Messenger RNA biogenesis [BR:hbq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     QI031_08590
Chromosome and associated proteins [BR:hbq03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    QI031_08590
SSDB
Motif
Pfam: Hfq_1 Hfq
Other DBs
NCBI-ProteinID: WGV27529
UniProt: A0AAJ6NVJ6
LinkDB
Position
complement(1949875..1950093)
AA seq 72 aa
MHTTEFDTTLPSIRQLQNLIKQAAVIEFKLVTGDLLTGKVAWQDPNCVCIVDENNQQSTI
CKQAIAYFQPKS
NT seq 219 nt   +upstreamnt  +downstreamnt
atgcacacaactgaatttgatacgacgctacctagcatccggcaattgcaaaacctgatt
aaacaagcagcagtgatagagttcaaactggtaacaggcgatctgctaacaggtaaggtt
gcatggcaagatccaaattgcgtatgtattgtcgatgaaaataatcagcaatccacaatt
tgtaaacaagcgatcgcctacttccagcctaagagttag

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