Halotia branconii: QI031_13030
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Entry
QI031_13030 CDS
T09011
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hbq
Halotia branconii
Pathway
hbq03410
Base excision repair
hbq03430
Mismatch repair
hbq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QI031_13030
03430 Mismatch repair
QI031_13030
03440 Homologous recombination
QI031_13030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbq03400
]
QI031_13030
DNA repair and recombination proteins [BR:
hbq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QI031_13030
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QI031_13030
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QI031_13030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
WGV28329
UniProt:
A0AAJ6NXK1
LinkDB
All DBs
Position
complement(2976623..2978800)
Genome browser
AA seq
725 aa
AA seq
DB search
MLDRSISKFSQSSRRLPNQRWQIYPQKAEFAQHLADLTNISPIVSQLLINRGIETPKQAQ
AFLDPESLILPTPLEEFPALAISVELLQKAIASQEKIAICGDYDADGMTSTALLLRSLRT
LGAKVDYAIPSRMHEGYGINKRIVEEFHSEGVGLILTVDNGISAYEPIARARELGVKVIV
TDHHDIPQILPPANAILNPKLIAESSPYRGVAGVGVAYILAVSVAQQLGKMKGLVQPMLA
LFTLGTIADLAPLTGVNRRWVKRGLKHLPKSQLPGVQALIQVAGVQARGTERAGGAGEAG
EAEEAGGDGKKLQSQIRNAKSLKPEDIGFRLGPRINAIGRIGNPQTMIELLTTDDMGIAL
ERAMQCEQTNTSRQQMCEEIEQAAIAHVESEFIASLQQDRVLVIVQPNWHHGVIGIVASR
LLERYGVPVFIGTYENAEHIRGSARGIPEFHVFAALEYCQDLLGKFGGHKAAGGFSLPAE
NLQALRSRLCEFANQCLEPQHLKPLLKIDAQVDFHQINQQLYQQLNALHPCGIDNPDPIF
WTPNVQVVEQKIVGKGHIKLTFAQTINQQQYKIKAIAWRWRDYLPLPLRVDIAYKLREND
FNGDTTIELELLGARLPNDHYSQESIHPKLLPQSHLFDALPPKPLRTNFQYNQRQYNCGI
YQNGVLPELRIKNPEGKVLVMHPGRTIGLLGTNRQDATEVDLSQPKYDSIIQAALQALSI
VSAEL
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtgctagatcgatctatatctaaattttctcaatctagtaggcgcttacctaatcagcgc
tggcaaatttatccacaaaaagcagaatttgcccaacatttggcggatttgacaaatatt
tcacctattgtcagccagttgttgattaatcgtggcatcgaaacaccaaaacaagcacaa
gcatttttagatccagagtctttaattttacctacgccactagaagaatttcccgcttta
gcaataagtgtagagttattgcaaaaggcgatcgcttctcaagagaaaattgctatctgt
ggcgattatgatgcagatggcatgactagcacggctctacttttgcgtagtctgcgtact
ttgggagctaaggtagattacgccatccctagtaggatgcatgaaggctacggtattaat
aaacgcattgtggaagaatttcacagcgaaggcgtaggactaattttaactgtagataat
ggcatctcagcttatgaaccaattgctagagctagagaactaggagtaaaagtaattgtt
accgatcaccacgatattccgcaaatattacctccagccaatgctatcctcaatcccaaa
ctcattgcagaatcttcaccttatcggggtgttgctggtgttggtgttgcctatatttta
gcggtgtctgttgcccaacaattaggaaagatgaaaggcttagtccagccaatgctagca
ctttttacactgggaacgatcgcagatttagctcctttaactggtgtcaaccgccgctgg
gtaaaacgtggtttaaagcatctacctaaatcccaattacctggggtgcaagctttaatt
caggtggctggggtacaggcgagggggactgagagagcagggggagcaggggaggcaggg
gaggcagaggaagcagggggagatggaaagaaacttcaatctcaaatccgaaatgcaaaa
tcgttgaagccggaggatattgggtttcgtttagggccgcgtattaatgcgattggacga
attggcaacccgcaaacaatgattgaattgctgactacggatgatatgggaatcgcgcta
gaacgcgctatgcagtgcgaacaaactaacaccagtcgtcagcaaatgtgcgaggaaatt
gaacaagcagcgatcgctcatgtagaatcagaatttattgcttctttacagcaagaccga
gtactagttattgttcaacctaattggcatcatggtgtaattgggatcgttgcttcccgt
ttattagaacgctatggtgttccggtatttatcggtacttatgaaaatgcagaacacatt
cgcggttcagcacgaggaatccctgaatttcatgtgtttgcagctttggaatattgccaa
gacttgctaggcaaatttggtggacacaaagcagctggaggtttttctctaccagcagaa
aatttacaggcattgcgatcgcgtttgtgtgagtttgccaatcagtgtttagaaccgcag
cacctcaagccactactcaaaattgatgcccaagttgattttcatcagatcaaccagcaa
ctttatcaacagttaaatgctctccacccttgcggtattgataatcccgatcccatattt
tggacacctaatgtccaagttgtggagcaaaaaattgttggtaagggtcatatcaaattg
acatttgctcaaactattaatcaacaacaatataagattaaagcgatcgcctggcgttgg
cgcgactacttacctctaccgctgcgagtagatattgcttacaagctgcgagaaaatgac
tttaatggtgacactaccattgagttggagttactaggtgctaggctgccaaacgatcat
tacagtcaggagtcaattcatcccaaactactaccgcaatctcatttatttgatgcttta
ccacctaaaccgctaagaaccaactttcagtacaatcagcgtcaatataactgtggcatt
tatcaaaacggtgttttaccagaattaaggattaaaaatcctgaaggcaaagtcttagtc
atgcatccaggacgtacaatcggtttgcttggtactaatcgtcaagacgctacggaggtt
gacttgtctcaaccaaaatatgacagcattatccaagctgccctgcaagcgttatcaatt
gtaagtgccgagctgtga
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