Halotia branconii: QI031_19640
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Entry
QI031_19640 CDS
T09011
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hbq
Halotia branconii
Pathway
hbq00550
Peptidoglycan biosynthesis
hbq01100
Metabolic pathways
hbq01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hbq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QI031_19640 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QI031_19640 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hbq01011
]
QI031_19640 (mrdA)
Enzymes [BR:
hbq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
QI031_19640 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
hbq01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
QI031_19640 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
BPL_N
Motif
Other DBs
NCBI-ProteinID:
WGV24008
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Position
4459708..4461543
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AA seq
611 aa
AA seq
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MALFSSSFSNSKKDTRTVGRGLQSIFLIIFTLLMTTGIGVRLAYLQIVEGPKLRQRAESN
RIRMIPKLPERGNIFDRNGKLLASTRYPHSVYLLPMAHTKPSWSIVGSRLEKILHISPEE
MEKKLEEAGPNSSSLIRVARDLNEVQITALKEYESELPEVEINTEAVRYYPHGKALAHVL
GYTRELTPDQLKARKDEGYRLGDVIGQMGIEKAYEKTLRGEWGGKQVEVDGTGKFIRVIG
EQQAKSGTDLHLTLDLEVQKAADKALGKLQGAVVAIDPNNGAVLAMASHPTFDPNIFSKQ
KLSQEDWQSVQGKNHPLVNRVLSAFPPASTFKIITTTSGLESGKFSPDTVLQTFGSLTIG
GVTFGEWNHAGFGPLGFPRAIAMSSDTFFYQVGRKVGGPTLIKWSREYGFGQKTGIEFAN
EESRGLVPDEIWKQKVFKMPWTIGDTINMSIGQGALQVTPLQAVIMFSVPANGGYRVKPH
LLKDHEEAKSWRESLDMKPSTIKVLRDGLRKVVTEGTGKLLNVPSIPPTSGKSGTAEAGV
GRPNHTWFGAYAPSNKPEIAVVAFGENSGGHGGTDCGPMVLQVLEAYFQHKYPGKYLKSQ
SEKSSVVTPGD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggctttattttcatcatctttctccaatagcaaaaaagatacacgtacagtaggacgt
ggcttgcagtcaatatttttaattatatttaccttattaatgactactggtattggagtt
cgtttggcatatttgcaaatcgttgaagggccaaaactccgccaacgagcagagtctaac
aggatacggatgattcctaaactaccagaacggggtaatatttttgaccgcaatggcaag
cttttagctagtacacgttatccccattctgtatatctgttgccaatggctcatactaag
ccttcttggtcaattgtcggttcgcgtttagaaaaaattcttcacatttccccagaggag
atggaaaaaaaattagaagaagcaggtcctaactcttcttcactaatccgagtggcacgg
gacttgaacgaagtacaaattacagctttaaaagaatatgaaagcgaacttccagaagta
gaaataaatacagaagcagttcgttattatcctcatggcaaagccttagcacatgtgctg
ggatatacacgagaacttactcctgaccagttgaaagccaggaaagatgaaggctaccga
ctaggagacgtaattggtcaaatgggaatcgaaaaagcttacgaaaaaacactgcggggt
gaatggggcggtaagcaagtagaagtagatggtacaggtaagtttatccgggtaatagga
gaacaacaagcaaaatctggtacagatttgcacttaaccctagatttagaggtgcagaaa
gcagcagacaaagctttaggaaaattacaaggtgcagttgtggcaattgacccaaataat
ggtgctgtcttagcaatggcatctcatcctacctttgatcctaatattttctccaagcaa
aaactttcccaggaagattggcaaagtgtccaaggtaagaaccatcccttggttaatcgt
gtccttagtgcctttccacctgccagtaccttcaaaattattactacgacatctggttta
gaatcgggtaaattttctcctgacacagtactacaaacatttggttctctgaccattggt
ggagtgacttttggcgaatggaatcatgccggatttgggccattaggatttcctagagcg
atcgccatgagtagtgataccttcttttatcaagttggcagaaaagtcggtggcccaacg
ttgattaaatggagtcgcgaatatggatttggtcaaaaaactggtattgagtttgccaac
gaagaatcaagaggcttagttccagatgagatatggaaacagaaagtttttaaaatgcct
tggactataggcgacactatcaatatgtccattggtcaaggcgctttacaagtcacacca
ctacaagcagtgattatgttttctgtcccagcgaatggtgggtatagagtcaagccacat
ttgctcaaagatcatgaagaagcaaaaagctggcgggaatcattagatatgaaaccgtca
actatcaaagttcttcgtgatggactacgaaaagtggtaacagaaggtacaggtaaactt
ttaaatgtgccatcaatcccccccacatcaggaaaaagcggtacggcggaggctggtgtt
ggtcgtcccaatcatacttggtttggtgcttatgcccctagtaataagccagaaattgca
gtggtagcgtttggggaaaactctggcggtcacggaggtactgattgtggcccaatggtt
ttacaagtactagaagcttattttcaacataaatatccaggcaaatatctgaaatctcaa
tctgaaaaatcttcagtcgtgactcctggcgattaa
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