Halotia branconii: QI031_21200
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Entry
QI031_21200 CDS
T09011
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hbq
Halotia branconii
Pathway
hbq03410
Base excision repair
hbq03430
Mismatch repair
hbq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QI031_21200 (recJ)
03430 Mismatch repair
QI031_21200 (recJ)
03440 Homologous recombination
QI031_21200 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbq03400
]
QI031_21200 (recJ)
DNA repair and recombination proteins [BR:
hbq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QI031_21200 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QI031_21200 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QI031_21200 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
WGV24290
UniProt:
A0AAJ6NPM1
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All DBs
Position
4830491..4832821
Genome browser
AA seq
776 aa
AA seq
DB search
MSEQQQWKITATEQPPNWFIEAVKQHTPASSGLHAAQLLWQRKIKDHQQLAAFINHKAYQ
TASPFEFGQEMHLAVARLQQARHAGEKIAIWGDFDADGITATSVLWDGLGLFFAQNTQLT
FYIPNRLKESHGLNHQGIDNLAQQDCKLIVTCDTGSTNINEIIYAKELGIDVIVTDHHTL
PEERPAVAAIINPRYLPSEHQLFHLSGVAVAYKLIEALYQTLPDVPKHPLTDLLDLVAIG
LIADLVQLSGDCRYLAQVGIQRLQADFKQPPAARRRPGVGRLLELCQKSGDRPTDISFGL
GPRINAVSRIQGDASFCVELLTSRDIQRCHELAEVTELANARRKSLQKDVQAQVGQKLTQ
LDLSTTSVIVLEDAQWPAGVLGLVAGQIAQETGRPTILLSTEDTTSPQPLAPSPSFLARG
SARSINSVDLYQLVKEQAHLLHRFGGHPFAAGLSLPIENIPLFTAAVNQQLRQSLGGTTL
TPTVQADLTVTVADLGKELFLELKLLEPCGMGNPVPKLLIQNCWFDNAWHRNQQDSQGKK
VQYIKTDFDIRDDSSRSPFPGIWWGHYKDELPIGRCDCIAELDYNTFKKRYEIRLIAVRP
AANLELTTQQSTSILDWRNQKDSTLSLNKSVLTIQDCPTNWDDLRAWWKRSLYHQQQLAI
AWSKPNHQPPNEIWLTLVGIAKYLNRTNHTVTRVQLLQKLGIRDQTLFLGFKALKYLGFT
VKLQDHDLRINHNPKNISTTLADNAAAKFLAAISEEQFQRKYFAEVPLSTIAVMIK
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaacagcagtggaaaatcacagcaacagaacaaccacccaattggttcatc
gaagcggtgaaacagcacacaccagcatcaagtggactacatgcagcacaattgttgtgg
caacgcaaaattaaagatcatcaacaattagcagcttttatcaaccataaagcttatcaa
acggcgagtccttttgaatttgggcaagaaatgcatctagcagtagctagactgcaacaa
gcacgtcatgcgggtgaaaaaattgctatttggggagactttgatgctgatggtattact
gctacatctgtgttgtgggatggtttaggactatttttcgctcaaaatactcagttaact
ttttatattcccaatcggctgaaagaatctcacggactcaaccatcaaggtattgacaat
ttagctcaacaagattgtaagttaattgttacttgtgatacgggtagcaccaatattaat
gaaattatttatgctaaagaactaggtatagatgtcatagtcacagaccaccacacttta
cctgaagaacgcccagcagtggcagcaattattaatcctcgttatttgccaagtgaacat
cagctatttcatctttctggggtagcggtggcttacaaattaatagaagccttatatcaa
actttgcctgatgttcccaaacatccattaacagatttattagatttagtggctataggt
ttaattgctgatttggtgcagctaagtggagattgtcgttatttagcgcaagtaggaatc
caacgactgcaagccgactttaaacaaccaccagcagcacgacgacgaccaggagtaggg
cgattattagaattgtgccagaaaagcggcgatcgccccacagatatttccttcggttta
gggccacgcattaatgccgtcagccgcattcaaggtgatgctagtttctgcgtggaatta
ttaactagccgagatattcaacgttgtcacgaactagccgaagtcacagaacttgccaac
gcccgcaggaagtctttacaaaaagatgtgcaagcacaagtaggacaaaaactcactcaa
ttagatttatccaccactagcgttattgttttagaagatgcccaatggccagcaggtgtg
ttaggtttagtcgccggacaaatagcacaagaaacaggccgccccaccatcttattaagc
acagaagacactactagcccccagcccctagcccctagtccctcttttttagcccgtggt
tctgcccgttcaataaattccgtcgatttataccaattggtgaaagaacaagcacatcta
ttacatcgctttggcggacacccctttgcagcgggtttgagtttgccaatagagaatatt
cctttatttacagcggcggttaatcagcagttacgacaatctttaggcggcacaactctc
acgcccacagtgcaagcagatttaacggtgacagttgcagacttgggcaaagagttattt
ttggaactgaaacttttagaaccttgtgggatgggaaatcctgtcccgaaactattaatt
caaaactgctggtttgacaatgcttggcatcgcaatcaacaagattcgcaagggaagaaa
gtacaatatattaaaaccgactttgatattcgagatgattctagtagaagtccttttcct
ggtatttggtggggacactataaagatgaattaccgataggacgatgtgattgtatcgcc
gaactcgactacaacaccttcaaaaaacgctatgaaattagattaattgctgtgcgtcct
gctgctaacttagaactgacaactcagcaatcgacatctatattagactggcgaaatcaa
aaagattcaacactcagccttaataaatcagtattaactattcaagattgtcccacaaac
tgggatgatttacgcgcttggtggaagcgatcgctttatcatcaacaacaattagcgatc
gcttggtctaaacccaaccatcaaccacctaacgaaatttggctaactttagttgggatt
gctaaatatctcaatcgtaccaatcatacagttacccgcgttcaacttttacaaaaactt
ggcattcgtgaccaaactttatttttaggattcaaagctttaaaatatttgggattcaca
gttaaattacaagaccatgatttacgcatcaaccacaatcccaaaaatatatctacaacc
ttagctgataatgctgccgccaaatttttagctgccatcagtgaagaacaatttcagcga
aagtattttgcagaagtgcctttatctactattgccgtgatgattaagtaa
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