Hevea brasiliensis (rubber tree): 110632314
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Entry
110632314 CDS
T05150
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110632314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hbr03036
]
110632314
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
110632314
SWR1 complex
110632314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-binding
Myb_DNA-bind_6
DBINO
CpxA_peri
Motif
Other DBs
NCBI-GeneID:
110632314
NCBI-ProteinID:
XP_021636190
LinkDB
All DBs
Position
Unknown
AA seq
2051 aa
AA seq
DB search
MEFTFKESMQRKRKKALEAPREPRRPKTHWDHVLEEMIWLSKDFESERKWKLAQAKKVAL
RASKGMLDQATREEKKLKEGEQRLRKVALNISKDVKKFWIKIEKLVLYKHQMELDEKKKR
ALDKQLEFLLGQTERYSTMLAENLVDKPLQQYSVVDQQDIPYEERQKNDTKEPAQLSSVV
PEPQSDSGDNDNDYDVQSDESEDDEHTIEEDEALITEEERQEELAALHNEVDIPVEELLK
RYALERVSGENTPEKKNNGANLTVEGGDHAESKGKDHSAVDDPEMNSLPVNTGRRCDEVN
GDLAMPENHLSEIETGETRNQSNVTGDLNKDLLHDSYEEQEDGDFVLANGEEKDDETTLS
EEEELAKADPNNTIDEIQLLQKESEIPLEELLARYKKEFSNDEVSEDESEYTPALSDNLL
DSPEHKDVELKQQDVSMNEIVEPGELLLVEHHLVNEREAGNEKIAEEGHESENRIADAAA
AARSAQPTGNTFSTTKVRTKFPFLLKYPLREYQHIGLDWLVTMYEKRLNGILADEMGLGK
TIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKR
QGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKR
RILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFSNPISGMVEGQEKVNKEVVDRL
HNVLRPFLLRRLKRDVEKQLPMKHEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFG
MISIIMQLRKVCNHPDLFEGRPIISSFDMAGIDIQLNSSVCSLLSPDPFSTVDLYGLGLL
FTHLDFSMTSWECDEVNAITTPSRLIKERANLDNLEEIGFQHKQRKKSPETSFFEEIRKA
VLEERLKEVKERAASIAWWNSLRCRKKPIYSTTFRELVTIKNQVDDIHRQKVDQLSCLYS
SKLADVILSPVEHFQKMINLIESFMFAIPAARAPVPICWCSKTGSSVFLHPTYKEKCSEM
LLPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAVLLRQLKSEGHRALIFTQMTKMLD
ILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLFGADTV
IFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS
GGYNTEFFKKLDPMELFSGHKALPLKNVQKEKNHSHANEVSVSNADVEAALKYAEDEADY
MALKKVEQEEAVDNQEFTEAIGRLEDDELVNDDDMKTDEPTDQDMTTQTKDVGVNVNIKD
PIEEKTLTFAANEDDVDMLTDVKQMAAAAAAAGQAILTLENQLRPIDRYAIRFLELWDPI
IDKAAMESEVRFEEEDWELDRIEKYKEEMEAEIDDDEEPLLYERWDADFATEAYRQQVEA
LAQHQLMEELEAEANEKEDADDGYCDTMIRNETPSNTKPKSKKKPKKAKFKSLKKGSLTS
ELKHVKEEPSIETMSMDDDVIYHEEAAYSDMTSQYPGVQKKRKKVETVYVESGKSSKKSK
KLKKTSETCLSDLDSSLSGKQQDDSVELKPCENMVADLEQKQAGRSKMGGRISITAMPVK
RVLMIKPEKLKKGNVWSRDCVPSPDSWLPQEDAILCAVVHEYGPQWSLVCETLYGMTAGG
FYRGRYRHPVHCCERFRELIQRHVLSAPENHFSEKTSSAGSGKALLKVTEDNIQMLLNVA
AEQPDHELLLQRHFTALLSSVWRMTSRVDRQQNLSSSRNGLYFGGKFFSSFNQISWNSVK
EPAKRMKFTTSAQSCKLLAAALHEFNSRPLDDTVSISNRIEDAPCISEQLEVTLEFEKEE
GDSLIPFPPVINLMIPITDPLRFRNKDVGEHNLKAFTNVAESRFKDAARACFEGSLGWAS
SAFPANDVKLRTASKPQSLGKHKLSVSDSKPPRSKLKKTSERGEMHNLFAEPALQPLLTV
SPRDPNLRFDLAPAVIQDGWTNDRDSCSISFLDEELPGELGSFEAMPHDYVPGLISGLDD
CSLLPEYTDIG
NT seq
6156 nt
NT seq
+upstream
nt +downstream
nt
atggaattcacctttaaggaaagcatgcagaggaagaggaaaaaggcacttgaagcacca
agagaacctcgtcgtcctaaaactcattgggatcatgttttggaagagatgatttggttg
tcgaaggactttgagtctgagaggaaatggaaattggctcaagcaaagaaggttgctttg
agagccagcaaaggcatgttggatcaggctacccgagaagaaaagaaattgaaggaaggg
gaacaacggttgcgaaaggttgcactcaatatttctaaggacgtgaagaagttctggatt
aaaatagagaagctggtgctttacaagcatcagatggaacttgatgaaaaaaagaagagg
gcacttgataaacagcttgagtttcttctaggacaaacagagaggtactccacaatgtta
gcagaaaatctggtggacaaaccattgcagcaatattccgtagtggatcaacaggatatt
ccatatgaggaaagacagaaaaatgatactaaggaaccagcacaattaagttctgttgtt
ccagagcctcagtcagatagtggagacaatgacaatgattacgatgtgcaatcagatgaa
tcagaagatgatgaacatactattgaggaagatgaagctctcataactgaagaggaaagg
caagaagaattggctgctctgcacaatgaagttgatattccagttgaggagttacttaaa
cgctatgctttggagagagttagtggagaaaatactccagaaaagaaaaacaatggagct
aacctgacagttgaggggggagatcatgctgagagcaaaggaaaagatcactctgctgtt
gatgaccctgaaatgaacagcttgcctgttaatactggtcgtcgttgtgatgaagtaaat
ggcgacttggccatgccagagaaccatttatcagaaattgagacaggtgaaaccagaaat
caatcaaatgttactggtgatctgaacaaagatctattgcatgattcctatgaggaacag
gaagatggtgattttgttcttgctaatggagaagaaaaggatgatgagacaaccttgtca
gaagaggaagaacttgcaaaagctgatccaaacaataccatcgatgagattcaattgctg
caaaaggagagtgaaattcctttggaagaattgcttgcaaggtataaaaaggagttcagc
aatgatgaagtttcagaggatgaatctgaatatacgcctgctttgtcagacaacttgttg
gattctccagagcataaagatgtcgaactgaagcaacaggatgtgtccatgaatgaaatt
gttgaacctggtgaacttttactggttgaacatcatcttgtaaatgaacgagaagcagga
aatgagaaaattgctgaagaaggacatgagagtgagaataggattgctgatgctgctgct
gctgcaagatctgcacagccaacaggaaatacattttcaacaaccaaagttcgcacgaag
tttccatttcttctcaagtacccccttcgtgagtatcaacatattggcctggattggctt
gttacaatgtatgagaaaaggttaaacgggattctagctgatgaaatgggacttggaaag
acaataatgactattgctttacttgcacacctggcatgtgaaaaaggaatatggggtcct
catctaattgtggttccaacaagtgtcatgcttaactgggaaacagaatttcttaaatgg
tgtcctgcctttaagattcttacttactttgggagtgcaaaagaacggaaattaaagaga
caaggttggctgaaaccaaactccttccatgtgtgcattacaacttacaggctggttata
caggattcaaaagtcttcaagaggaagaagtggaagtacctgattttggatgaagctcat
ctgattaaaaattggaagtcccagagatggcaaactcttctaaacttcaattcaaaacga
cgcatcttattaactggtactcccctgcagaatgatctcatggaactctggtctctaatg
catttcttgatgcctcacatctttcagtctcaccaggagttcaaggattggttcagcaat
ccaatatcagggatggtagagggacaagaaaaagtaaacaaagaagttgttgatcgtttg
cataatgttcttcgtccatttctacttcgtcgactgaaaagggatgtggagaagcagctg
ccaatgaaacatgaacatgtcatctattgtaggctttcaaagaggcagcgtaatttgtac
gaggacttcattgcgagctcggagacgcaagctacccttgctagtgctaacttttttggg
atgatcagcattataatgcaacttcgtaaagtttgcaatcatccggacttatttgagggt
cgcccaattattagttctttcgatatggctggtatagacatccagttgaattcttctgta
tgttcgttgctttcacctgacccgttctcaactgttgatctttatggtttggggcttcta
tttactcatcttgattttagcatgacttcttgggagtgtgatgaagtaaatgctattact
actccttcaagattaatcaaagagcgtgccaacctagataacttagaagaaattgggttt
caacataaacagcggaagaagtcaccggaaacaagtttttttgaggagattagaaaggca
gtgcttgaggagaggctaaaagaagtgaaggaacgggcagcatctattgcatggtggaat
tccttgaggtgccggaaaaaacctatttactcaacaacctttcgagagcttgtcaccata
aagaatcaggttgatgatattcatcgccaaaaggtagatcagctctcttgtttgtactct
tctaagctcgctgatgttattctttcaccagttgaacacttccagaagatgattaatctt
atcgagtcttttatgtttgccatacctgctgcacgtgcaccagtaccaatttgttggtgc
agtaaaacaggaagttctgtgtttctgcatccaacttataaggagaaatgctctgaaatg
ttgttgcctcttctttcacctattagacctgcaattgtcaggagacaagtgtatttccct
gacaggcgattgatacaatttgactgtggtaagttgcaagaacttgcagttttgcttcgg
cagttgaaatcagaaggtcaccgagcattgatattcacccagatgaccaaaatgcttgat
atattggaggctttcataaatttgtatggttacacttacatgcgtttagatggatccact
caaccagaggagagacaaacattaatgcagcgattcaacacaaatcccaagatttttctc
ttcattttgtcaacccgtagtgggggtgttggcatcaatctttttggagctgatacggtt
atcttttatgatagtgactggaatccagcaatggatcaacaagctcaagatcgctgccat
cgaataggacagacacgtgaagtacatatctacaggttaatcagcgagagcactattgag
gagaacatcttaaagaaagccaatcagaagcgagctcttgatgatttagtcatacagagt
ggaggctacaacacagagtttttcaagaagcttgatcctatggaattattctctggtcat
aaagctcttccattgaaaaatgtacagaaagagaagaatcatagccatgcaaatgaggtt
tctgtgtctaatgcagatgtggaggctgctttaaagtatgcagaagatgaagcagattat
atggcattgaagaaagttgaacaggaagaagctgtggataaccaggagtttacggaagcc
attgggagattggaagatgacgagcttgttaatgatgatgatatgaagactgatgagccc
actgatcaggatatgacaactcaaactaaagacgttggtgtgaatgtaaatataaaggat
cctattgaagaaaaaactctaacttttgctgccaatgaagatgatgttgacatgctgact
gatgtcaaacagatggctgcagcagcagcagctgctggacaagctatcttaactttagag
aatcagctccgtcctattgacagatatgctatacgttttctggaattgtgggatccaatt
atagacaaagcagccatggaatctgaagttcggtttgaggaggaagattgggaactagat
cgtattgagaaatacaaagaggaaatggaagctgagattgatgatgacgaggaaccactg
ttatatgaaagatgggatgctgattttgcaactgaggcataccgacagcaagttgaggcc
ctagctcaacatcagttgatggaagagctggaagctgaagctaatgagaaggaagatgca
gatgatggatattgcgataccatgatcaggaatgaaacgccaagcaatactaaacctaag
tccaaaaagaaaccgaagaaagccaagttcaaatctctgaagaaaggatctctcacttct
gaactgaaacatgtgaaagaggaaccgtcgattgaaactatgtccatggatgatgatgta
atatatcatgaggaagccgcttattcagatatgacatcacaatacccaggtgtgcagaaa
aaacgtaagaaagttgaaacagtttatgttgaatctggaaagagctcgaagaagtctaag
aaattgaagaagacctctgaaacgtgcctgtcagatctagactcaagcctgtctggtaag
cagcaagatgattctgtagaattaaaaccatgtgagaacatggttgctgatcttgagcag
aagcaagcaggcagaagcaaaatgggaggaaggatctccatcactgccatgcctgtgaag
cgtgtcttgatgattaagccagagaagttaaagaaggggaatgtttggtcaagagattgt
gttccatctcctgattcttggttgccacaggaagatgcaatattatgtgctgttgtgcat
gaatacggtccacaatggagcttggtctgtgaaacattgtatgggatgactgctggtggg
ttttataggggaagatatcgccatccagttcattgttgtgagagatttagagaactaatt
caaagacatgtcttgtctgcccctgaaaatcattttagtgaaaagacaagcagtgcaggg
tctggaaaggccctcctcaaagtaactgaggataatattcagatgctcttaaatgttgct
gcagagcagcctgatcatgaattacttctccagaggcacttcactgctctgctttcttct
gtatggaggatgacatcacgcgttgaccgccaacaaaacctttcatcatctagaaatggc
ctctattttggtggaaagtttttcagctctttcaatcagatatcctggaattctgtgaaa
gaacctgcaaaaagaatgaaattcactacttcagctcagagttgcaagttgttggcagct
gcactccatgaattcaacagtagacccctggatgacacagtctccatttctaaccgaatt
gaagatgctccttgcatttctgaacagttggaagtaacgctggaatttgaaaaggaggaa
ggtgattcattgattccatttccacctgtcataaatttgatgatacccatcacagaccca
ctaagattcagaaacaaggatgttggagaacataatcttaaagctttcacaaatgtggct
gagagtcgattcaaggatgcagcgagagcttgttttgaaggcagtctgggttgggcatca
tctgcattcccagcaaatgatgtcaagttgcggacagcttcaaagccacagtccttggga
aagcataagctgtctgtctctgactcgaagccacctagatcaaaattgaagaaaacttca
gagcgtggtgagatgcataatttatttgcagagccagcattgcaaccactgttgacagtt
tcacccagggaccccaatttaaggtttgaccttgctccagctgtcattcaggatgggtgg
acaaatgatagagactcttgttctatttcttttttggatgaggaacttccaggggaactg
gggagctttgaagccatgcctcacgattacgtccctggtttaatctctggtctagatgat
tgttcgttgttgcctgaatatactgatattgggtag
DBGET
integrated database retrieval system
