Hevea brasiliensis (rubber tree): 110632368
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Entry
110632368 CDS
T05150
Name
(RefSeq) zinc finger CCCH domain-containing protein 41-like
KO
K13192
RNA-binding protein 26
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hbr01009
]
110632368
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110632368
03041 Spliceosome [BR:
hbr03041
]
110632368
Protein phosphatases and associated proteins [BR:
hbr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110632368
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
110632368
Spliceosome [BR:
hbr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110632368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
zf_CCCH_4
RRM_Nup35
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
110632368
NCBI-ProteinID:
XP_021636276
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MELKVSSLKSGGLSPPDCSSDPEEKEVSDEDDDDRNHKHRRRETRSQSLERGSLEPVFTR
SYRKHYKPFENGHPFRENESQGSETWKNYNAVPLDKDFTSKFEKRRPGMASLPRVGMDLN
QRIRSNQTFSGEHGPGRGRGRDPGSWNQRDSRFSSVDIASQMVQQGSITPGLFAGRGLPN
VPNAQNASWNAFGLFPGIPNGGLDALHSIGLQGAPRPAVNSSLNMGIPRQRCRDFEERGF
CLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSLANAPLVGTPAGPGALLSVGAPSATLMN
SKGLHSRNSKPGMVDDGMGLNGGYSGSASVSGADLYDPDQPLWNNNGPETSSALLALNSS
KNDENESFMSVDPSDRHNVRLRDTTDNECSIRSTGIPVGSQSTGSSVWGRVGSVKNRLDM
KEKTDLIMNTSDHGNNEAKEDHEALANIQGTTCQGKRMITDDVGPRTIDSAARIQSDTMR
NIRKSSQKALRTLFVSGIPQKNNKRDALLSHFQKFGEVVDIYIPLNSERAFVQFSKREEA
EAALRAPDAVMGNRFIKLWWANRDSIPDDGMNSSSGASVTPCGVPAGSVPPQPLIGNRGK
DNLQSAASKGTMVPPSDVSLPPTDHPKPIINGPKAPPPVQKKLELEQLRDELRKKQELLD
QKRNDFRRQLDKLEKQATGVKGEVVAEPASKRQRVGIATDVAKATTPRSFDPIAGVSSPR
TEMMVDKNKSVENLISSSPKTSMSFLQHEPTGSKQPIYPVAPAGAVFVMNRYKLDNRPTA
FKIVPPLPPGLANVDALKEFFSSYGDLAAVELEDIDAGGSEATKNCSARLTFTTRRSAER
AFLNGSCWQGNNLKFTWVTSSTSGSDLSVRENIPSASKCPGHTDVQPTELLASTGSQEAS
ASENGEPETSERISSADHMELHEASEPCPTSMHGEDSTKCEDSATSMRSKEEWQKRELSP
TTTSGENESHKGDTC
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggagctcaaggtttcatcactaaagtcaggaggtctttctcctcctgattgctctagt
gatcctgaggagaaggaagtcagtgatgaggatgatgatgatcgcaatcataaacatcga
agaagagagacacgttctcaatctttggagagaggttcactggaacctgtttttacaagg
tcatacaggaagcactacaaaccatttgaaaatgggcatcctttcagggagaatgaatct
caagggagtgaaacctggaaaaactataacgctgttcctctggataaagacttcacctca
aaatttgaaaagagacggcctggaatggcatcattaccccgagtgggtatggatttgaat
caaagaataaggtcaaaccaaacattttccggagagcatggtcctggtagaggaagagga
agggaccctggttcttggaaccagcgtgattctaggttcagctcagttgatattgcttct
caaatggttcagcaaggatccattacacctggtctctttgcaggaaggggattgccaaat
gttccaaatgcacaaaatgcatcctggaatgcatttggattgtttccaggaattcccaat
ggtggccttgacgcactccattccattggtttgcaaggagcacccagaccggcagtaaat
tcttcattgaacatgggcattccccgccagcggtgcagagactttgaggagcgtggattt
tgtctaagaggggacatgtgtccaatggagcatggtgtcaatcgtattgttgtcgaagat
gttcagagcctttcacagttcaatctccctgtttcacttgcaaatgcaccactagtggga
acacctgctggacctggggctttgctatcggttggtgctccttcagccacattgatgaat
agcaaaggactacacagcagaaatagcaagcctggaatggttgatgatggtatgggcttg
aatggtggatactctggctctgctagtgtgagtggagcagacttgtatgatccagaccaa
ccactgtggaataacaatggtcctgaaacatcaagtgcactcttagcactaaattcatcc
aaaaatgatgaaaatgaatccttcatgagtgttgatccttctgaccgtcataatgtcagg
ttgcgtgatactactgacaatgaatgttcaattagaagcactgggatccctgttggttca
cagagtacaggttcatccgtttggggtagagttggtagtgtgaagaatagattagatatg
aaagagaaaacggatttgattatgaatacctcagatcatgggaataatgaagcaaaagaa
gatcatgaagcattagccaatattcaaggtactacttgtcaaggaaagcgaatgattact
gacgatgttggccccagaactattgattcagcagccaggatacagagtgataccatgcgt
aatataaggaaatcttctcaaaaggcactacgtacactatttgtcagtggcattccacaa
aaaaacaacaagagggatgctcttctttctcattttcaaaaatttggggaggttgttgac
atttatatcccattgaatagcgaacgagcttttgttcagttctcaaaaagggaagaggca
gaagctgctttaagagcacctgatgctgtaatgggcaatcgctttatcaaactatggtgg
gctaatcgtgacagcatacctgatgatggcatgaacagtagcagtggtgcatctgtaact
ccctgtggtgtgccagctggttcagttccaccccaacctttaattggtaatagaggaaaa
gataatcttcagtctgctgcttctaagggtactatggtccccccatctgatgtgtctctt
cctcctactgatcatcctaagcctattataaatggtcccaaggctcctcctcctgtgcag
aagaagctagagctggaacaattgagggatgagctccgcaagaagcaggagttgctggac
cagaagcgaaatgacttccggcgccaattggacaaactcgagaaacaagctacaggagtt
aaaggtgaggtagtggctgagcctgcttctaagagacagagagtaggaatagcaactgat
gttgcaaaagctactactccaaggtcctttgaccctattgctggtgtgtcatctccacgt
actgagatgatggtggataagaataaatcagtggaaaacctcatatcatccagtcccaaa
acaagcatgtcatttttgcagcatgaacctacaggctcaaagcagccaatttatccagtg
gcacctgcaggggcagtctttgtgatgaacagatataagttggataatcggcccacagct
tttaaaatagttcctccgttaccacctggtttggcaaatgttgatgccttgaaggaattc
ttctcatcatatggcgatcttgctgctgttgaactagaagatattgatgctggtgggtca
gaggcgacaaaaaattgctcagcccgcttgactttcacaactcgccgttcagctgagagg
gcgtttttaaatggcagttgttggcaaggcaacaacttgaagtttacatgggtgacatct
agtacctctggcagtgacctttctgtcagagaaaatattccttctgcctccaagtgtcct
ggacatactgatgtgcagcccactgaattattagcaagcactggttctcaggaagcttct
gcatctgaaaatggggaacctgaaacttcagaaagaattagtagtgctgaccacatggag
ttgcatgaagcttccgagccgtgtccaacttcaatgcatggtgaggactcaactaaatgc
gaggacagtgcaacatcgatgcgcagcaaagaagagtggcaaaaaagagagctcagtcca
actacaacatctggagagaatgagtcgcataagggcgatacctgttga
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