Hevea brasiliensis (rubber tree): 110632944
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Entry
110632944 CDS
T05150
Name
(RefSeq) sm-like protein LSM4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03018
RNA degradation
hbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110632944
09123 Folding, sorting and degradation
03018 RNA degradation
110632944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110632944
03041 Spliceosome [BR:
hbr03041
]
110632944
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110632944
mRNA degradation factors
5'-3' decay
Lsm complex
110632944
Spliceosome [BR:
hbr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110632944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
110632944
NCBI-ProteinID:
XP_021637020
LinkDB
All DBs
Position
Unknown
AA seq
148 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGRGREEGGRPVKGIGRGLDDGS
AKAAGGGRGRGGSGGKTGGNRGAGRGRG
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctctttctctccttaagactgcacagggccacccaatgttggtggaactgaaa
aatggggagacttacaatggacatttggtcaattgcgacacttggatgaatatccatctc
cgtgaagtcatatgtacatctaaggatggagataggttttggagaatgcccgaatgctat
atacgtggaaatactattaaatatcttcgagttcctgatgaggtgattgataaagttcag
gaagaaaccaagagccgcacagatcggaagccacctggagtggggcgtggaagaggacga
ggtagagaggaaggtggaaggccagtgaaaggcattgggcgtggccttgatgatggaagt
gccaaggctgctggtggaggccgtggcagaggtggttcaggtggaaagacaggtggaaat
agaggcgcagggcggggcaggggctga
DBGET
integrated database retrieval system