Hevea brasiliensis (rubber tree): 110633966
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Entry
110633966 CDS
T05150
Name
(RefSeq) probable RNA polymerase II transcription factor B subunit 1-1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03022
Basal transcription factors
hbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110633966
09124 Replication and repair
03420 Nucleotide excision repair
110633966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbr03021
]
110633966
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110633966
Transcription machinery [BR:
hbr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110633966
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110633966
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
DUF5487
SHOCT
Motif
Other DBs
NCBI-GeneID:
110633966
NCBI-ProteinID:
XP_021638508
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MASGQVTKRVKYKTSVKDPGTPGRLLLTMEKLAFRPNNPNSASKFDMEFRYIKNHKYTKE
GSNKAPMLNLTSNQGVSYIFEFENYNDLQVCKEFVGKALSKSGETPKPADTSQSLSEQPS
TEELLLRMNLLRENSELQKLHKRFVSDGVLTDAEFWATRKKLLSGDLSRKSKQRVGLKSV
MLSDSKPLIDGRTNKVTFNLTPEIVREIFAEKPAVHQAYLNVVPNKMTDKDFWTKYCRAE
YLHHSKNAHAAAAEAAEDEELALFLKPDDILASETRRKIRCVDPTLDMEADQGDDYTHLP
DHGIVRDGSKEITDSQNEPYMRTLLQDLNRHSAVVLAGTAIDDEQLKDTQTVAEALIQSK
QGHKTANEEDDGNASQEKLNRISKMMEIEDLQGSNDLPLAPLCIKDPRDYFDSQQACAFK
TSRDTTIGTEAVSTREAYGSLRDSISQIKVMGLNDPIIKPEVAMKVLSVLTHNISSTKYH
LGKNPRESVLDGFPNKIKEDLLHHWMSIEELLRHYWSSYPVTTAYLYAKVNRLKDAMSKI
DSQLQVILAEMKESVQSDLRNQLTLLIRPMQQALEAAMQHHDADLQKRLAKSGERPNGYV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgggcaagtgacaaagcgagtgaaatacaagacctcagtgaaggaccctggc
actcctggtcgtcttttattgactatggagaaattagcattcaggcctaataatcctaac
tcagcttcaaagtttgacatggagtttagatacattaaaaatcacaaatacaccaaggag
gggtccaataaagcaccaatgcttaatcttacctcaaatcagggtgtaagttacatattt
gagtttgaaaattacaacgatctccaagtttgcaaagaatttgtgggaaaagccctttcc
aagtctggagaaactccaaaacctgctgatacttcacaatccctttctgaacaacccagt
accgaagaactgcttcttcgaatgaacttgctgcgagaaaatagtgagttgcagaaactt
cataagcggtttgtgagtgatggtgtgttgacagatgctgaattttgggcaacaaggaag
aagttgctcagtggggacttaagtagaaaatcaaagcaacgagtgggtcttaaaagtgtt
atgctttcagactccaagccactgattgatggacggacaaacaaggttacatttaatttg
acaccagagatcgtacgtgagatttttgcagagaaaccagctgttcaccaggcatacttg
aatgtagttcctaacaagatgacagacaaggacttctggaccaaatattgtagagctgaa
tacctccatcattcaaaaaatgctcatgctgcagccgcggaggctgctgaagatgaggaa
ctagctctttttctgaaacctgatgatattttggccagtgaaactcggcggaagattaga
tgtgttgatccaactctagacatggaagctgaccagggggatgattatacacatcttcca
gatcatggaattgttcgtgatggtagcaaggagataacagattcacagaatgagccatac
atgaggactttgttacaggaccttaatcgccactctgctgttgttcttgcaggaacagct
atagatgatgagcagttgaaagacacacaaactgtagcagaggcacttattcagtcaaag
cagggacataagacagctaatgaagaagatgatggcaatgcaagccaggagaaattgaat
agaatttccaaaatgatggaaattgaggatcttcaaggatcaaatgatcttcctttggca
cctctctgcattaaggatccacgggactattttgattctcaacaagcttgtgcatttaaa
acttcaagagacacaactattggaacagaagcagtgagcactcgggaagcttatggttct
ttgagggactccatttctcagattaaagttatgggattgaatgatcccataattaaacct
gaagttgctatgaaggttctttctgtattgacacataatatctcaagcactaaatatcat
cttggaaagaatcctagggagagtgttttggatggtttcccaaacaaaataaaggaggat
ttgctgcatcattggatgtctattgaggagttgctgagacattactggtcatcatatcca
gtcactactgcatatctttatgccaaggtaaatagactgaaggatgcaatgtcaaaaatt
gattctcagctacaggtgattttggcagagatgaaggaatctgtgcagtcagatcttcga
aatcagcttacactccttatacgtccaatgcaacaggctctggaggcagccatgcaacat
catgatgcagacttgcaaaagagattagcaaagagtggagagagaccaaacggatatgtc
tag
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integrated database retrieval system
