Hevea brasiliensis (rubber tree): 110634810 Help Entry 110634810         CDS       T05150                                  Name (RefSeq) symplekin isoform X1   KO K06100   symplekin Organism hbr  Hevea brasiliensis (rubber tree) Pathway hbr03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:hbr00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     110634810  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:hbr03021]     110634810    03019 Messenger RNA biogenesis [BR:hbr03019]     110634810 Transcription machinery [BR:hbr03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      110634810 Messenger RNA biogenesis [BR:hbr03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      110634810     U7-dependent histone pre-mRNA processing factors      110634810 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N HEAT_2 HEAT_EZ mTOR_dom Adaptin_N Dpy-30 Motif Other DBs NCBI-GeneID:  110634810 NCBI-ProteinID:  XP_021639639 LinkDB All DBs Position Unknown AA seq 1323 aa AA seqDB search MVGMTNSTSRDRLATLVRSSIDIPSKLENLRQLNQNLLQEDDTGSLSEFLPRLFELQSDQ HSPVRKRVAQIIGEIGLNHLEFVPEIVPVLMSVLEDSAPAVARQAITCGINLFRSTLQKL AIQGLYASELDDLLKSSWSSMLEFKEKMYSIAFQPGSGGVRLLALKFVEAVILLYTPDPN GSPEPPRHEGELVEFNISWLRGGHPILNIGDLSIEASKRLGLLLDQLRFPTVKSLNNLVI VVLINGLATIAKKRPPYYGRILPVLLGLGPSGSGIEVMHASGANHALKSAFLTCLKCTHP GAAPWRDRLVGALRELKAGGVAEEALHQVFKIKRGTEEGEEVSTAVMDEVETFDGIQGIL GRKRSGAEDSSELAEDNDVSGKRARLMPSVSEESTKELNRNISASQDDGPADGPTVNGGE DDTGPVQQLVAMFGALVAQGEKAVGSLEILISSISADLLAEVVMANMRYLPTSHPQAEGD DESLVNMTIIGSNTQAKYPYSFLTNVLSLSTSFPPIALRLNAHQSASNDIERTAQVQPVA DSNVVYSGISHGAENEILPASLPAPSNVILSGMEMDIPSDSLSLGNLESEIPGLDSSAHD DGCSETVAALSLVSTDLEDASQEQVTSLDGSSTLDLHPAASTDRSEELSPKAAVADSNCL ISSTTATVSLPSTFVLPKMSAPVVDLAEEQKDQLQNLAFTHIVEAYKQIAVAGGSQIRFS LLAYLGVEFPSELDPWKLLQKHILSDYVNHEGHELTLRVLYRLFGEVEEERDFFSSTTAA SVYEMFLLTVAETLRDSFPPSDKSLSRLLGEAPSLPKSVLNLLESLCCPGNDKAEKEFPS GDRVTQGLSTVWSLILQRPPMREVCLKIALQSAVHHLEEVRMKAIRLVANKLYPISSIAQ QIEDFAKEKLLCIISRDTTDGTDAEGLSSEPQEDSNFEKTSNDHQSVSAASKDISSDAHQ SFTSESASSLSIPEAQRCMSLYFALCTKKHSLFRQIFLIYKSTSKAVKQAVHRHIPILVR TMGSSSELLEILSDPPIGSENLLMQVLQTLTEGTVPSPELLFTIRKLYDSKLKDIEILIP VLPFLPRDEVLLTFPHLVNLPPDKFQAALARVLQGSPHSGPVLSPAEVLIAIHGIDPDKD GIPLKKVTDACNACFEQRQIFTQQVIAKVLNQLVEQIPLPLLFMRTVLQAIGAFPALVEF IMEILSRLVNKQIWKYPKLWVGFLKCALLTKPQSFSVLLQLPPPQLENALNRTAALKAPL VAHASQPNIKSSLPRSILVVLGIAPDPQTSSQLQTSHNLTGDASNNSDKEVLAEKSKESS TAS NT seq 3972 nt NT seq  +upstreamnt  +downstreamnt atggtggggatgacgaattccacttcgagagataggctcgccaccctcgtcaggtcgtcc atagacataccttcaaagcttgaaaatttgcgtcaattaaaccaaaatttgctccaagaa gatgacactggttcgctttctgagttcctccctcgcctcttcgagttgcagtctgatcag cattctccggttcgcaaacgtgttgcccagataattggagaaattggactcaaccacttg gaatttgtgcctgaaatcgttcctgttttaatgagtgttttggaagatagtgcaccagcc gttgctagacaagccatcacttgtgggattaatttgtttcggtctacccttcaaaaactt gcgattcagggactttacgccagtgagttggatgatttgctcaagtcatcgtggtcttca atgttagaattcaaggaaaaaatgtactctatagcttttcagcctggaagtggcggggta aggttgctagccttgaagtttgtggaagcagtcattcttctttacacacctgatccaaat ggctccccagaaccccctcgtcatgaaggagaacttgtggagtttaatatatcatggctt cgtgggggccacccaatactaaatataggagatttgtcaattgaggccagcaaaagattg ggtttattgcttgatcagcttaggttcccaacagtgaaatctctcaataacttggtgatt gtggtgctcattaatggtcttgctacaattgcaaagaaaaggcccccatattatggacgc atcctgccagttttacttggtttgggtccatcaggctctggtattgaagttatgcatgca tctggagcaaatcatgctttgaaaagtgctttcctcacctgcttgaaatgtacgcaccct ggtgctgcaccgtggcgggatcgtttagttggtgccctaagagagctgaaagctggaggg gtcgctgaggaagccctacatcaagttttcaagattaagaggggtactgaggagggagag gaagtttcgacagctgttatggatgaggttgaaacatttgatggcatacaaggtatattg ggaaggaaaagatctggagcagaggatagtagtgagttggcagaagacaatgatgtgtct ggaaaacgtgccagactgatgccaagtgtttcagaggaatcaactaaagagttgaatagg aatatttcagcgtctcaagatgatggtcctgcagatggacctacagttaatggaggagaa gatgatactggacctgtacagcaacttgttgcaatgttcggagccttggttgctcaaggt gaaaaagctgttggttccttggagattcttatttcgagtatctctgctgacttgttagct gaagtagtgatggctaacatgcgctaccttcctactagtcatcctcaagctgaaggagac gatgaatcgctagtgaatatgactataattggtagtaacactcaagccaagtatccatat tcatttttgactaatgttctttcactttctacttctttcccgccgatagcattacggcta aatgctcaccagtcagcttccaatgacatagagaggacggcacaagtgcagcctgtggct gatagtaatgttgtatattctggaataagtcatggagctgaaaatgaaatcttacctgct agtttaccggcaccttcaaatgtgatcttatctggaatggagatggatattccatctgat agcctgagtcttgggaatctggagagtgagatacctggcctagattcttctgctcatgat gatggatgttctgaaactgtggccgctttgtcattagtctctaccgatctggaagatgcc agtcaagagcaagttacaagtttggatggaagttcaaccctggatttgcatccagcggca tcaacagataggtcagaggagcttagtccaaaagcagctgtggcagattctaactgtcta atctcttctacaacagctactgtgagtttacctagcacttttgtcctcccaaaaatgtca gcacctgttgttgatcttgcagaagaacagaaggatcaactgcaaaatttggcctttacg cacattgttgaggcctataagcaaatagcagttgcgggaggttcacaaatccgcttttcc ttgcttgcttatttaggagttgagtttccatcagagttagacccgtggaaactccttcag aagcacatattgtcagattacgtgaatcatgagggacacgagttgactttgcgtgtcctc tacagattatttggtgaggtagaagaggaacgcgatttcttttcttctacaactgctgct tctgtttatgaaatgttcctcctaactgtggctgaaacacttagagactcttttcctcca tcagacaaatcattaagtagattgcttggtgaagctccttctcttccaaagtcagttctg aatttgttggagtccttgtgttgtcctggaaatgataaagctgagaaggagttcccaagt ggggatcgagttactcaaggtctcagcactgtgtggagcttgattttgcagaggcctcct atgcgagaagtctgcttgaaaatcgctttgcagagtgcagttcatcacttggaggaagtg cgcatgaaagcaattcgcctggtggcaaacaagctttatcctatctcatccattgctcaa caaatagaagattttgctaaggaaaaattgctctgtatcataagtagagataccacagac ggtacagatgctgaaggattgagcagtgaaccacaggaggattccaattttgaaaaaaca tcaaatgaccatcagtcagtgagtgctgccagcaaagatatttcttcagacgctcatcaa tcattcacatcagaaagtgcatcatctctctcaatccctgaggcccagcggtgcatgtca ctgtactttgctctttgcacaaagaaacactccctatttcgccaaatttttctcatttat aaaagcacttcaaaggcagtgaagcaggcagttcatcgccatattccgatactagtccgc actatgggatcatcatctgaacttcttgaaatactttctgatcctccaattggaagtgaa aatcttctgatgcaggttttacaaacattgacagaggggacagttccttctcctgaatta ttgttcaccattaggaagttatatgattcaaagctaaaggatatagagattctgattcca gtactgccattcctaccaagagatgaggttttgctgacctttccccatcttgtgaatctt cctcctgataagttccaagctgcacttgcacgtgtactacagggatcacctcactctggt ccagtgctctctccagcagaagtgttaatagccattcatggaattgatcccgacaaagat ggaattcccttgaagaaggtcacagatgcatgtaatgcttgtttcgagcaacggcagata tttactcaacaagttattgcgaaagttttgaatcagttggttgagcagattcctcttcct ttgttattcatgcgtacggtgttacaagctataggtgcttttccagcactggtggaattt ataatggagatcctttctcgtcttgttaacaagcagatatggaaatacccgaagttgtgg gttggattcttgaagtgtgccctcttgacaaagcctcagtcattcagtgtgttgcttcag ctacctcctccgcagctggaaaatgcactgaatagaactgcagcattgaaagcccctttg gttgctcatgctagccaaccaaacatcaaatcttcactaccaaggtctattctggtggtt ctgggaatagctccagatccacagacttcaagtcagttgcaaacaagtcacaatctaact ggtgatgctagcaataactcagataaggaggtgctggcagagaaatctaaagaatcttct actgctagttga

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