KEGG   Hevea brasiliensis (rubber tree): 110635169
Entry
110635169         CDS       T05150                                 
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
hbr  Hevea brasiliensis (rubber tree)
Pathway
hbr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110635169
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hbr03019]
    110635169
Messenger RNA biogenesis [BR:hbr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     110635169
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     110635169
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 110635169
NCBI-ProteinID: XP_021640082
LinkDB
Position
Unknown
AA seq 287 aa
MVGLSVGEKHFIQGGINQNLRSDGRKRDTYRPIFVETGVIPQANGSARIRMGATEVIASV
KAELGRPSALQPDKGKVAIFVDCSPVAEPTFEGRGGEDLSTELSVALQRCLLGGKSGAGA
GIDLSSLVVAEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVHVTAAASGD
EQPEVDISDEEFLQFDTSEVPVIVTLTKVGRHYIVDATSEEESQMSSAISVSINRKGHIC
GLTKRGGAGIDPSVISDMISVAQYISEQLINKLDSEISAAEADEDES
NT seq 864 nt   +upstreamnt  +downstreamnt
atggtaggactctcagttggagaaaagcatttcatacagggtggcattaatcaaaatctc
cgctctgatggtcgaaaacgagatacctatcgacccatttttgttgaaactggagtcatc
cctcaggcaaatggctcggcacgaatcaggatgggtgcaacagaggttattgctagtgtg
aaggctgagcttggaaggccaagtgcattgcagcctgataagggaaaggttgctatattt
gtcgattgtagcccagttgcagaaccaacatttgagggcagaggcggcgaggacctgtca
acagaactttcagttgctcttcagcgttgtctcctaggtggtaaaagtggggcaggtgct
gggattgatctatcatctctagtagttgcagaaggaaaaatttgttgggatctttatatt
gatggccttgttgtcagttcagatggaaatcttttagatgctcttggtgctgcaattaag
gctgctttgagcaatacagggatcccaagagtccatgttacagctgctgcatcaggtgat
gagcaaccagaggttgacataagtgatgaagaatttcttcaatttgacacatcggaggtt
cctgttatagttaccttaacaaaggtggggagacactatattgtagatgctacttcagaa
gaggaatcccagatgagctctgcaatttctgtttccataaataggaaagggcatatttgt
gggttgacaaaacgaggaggtgcaggcattgatccaagtgtgatttctgacatgatatct
gttgcacaatatataagtgagcagctgattaataaattggactctgaaatatctgctgca
gaggctgatgaagatgaatcatga

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