Hevea brasiliensis (rubber tree): 110635169
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Entry
110635169 CDS
T05150
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110635169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110635169
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110635169
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
110635169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110635169
NCBI-ProteinID:
XP_021640082
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MVGLSVGEKHFIQGGINQNLRSDGRKRDTYRPIFVETGVIPQANGSARIRMGATEVIASV
KAELGRPSALQPDKGKVAIFVDCSPVAEPTFEGRGGEDLSTELSVALQRCLLGGKSGAGA
GIDLSSLVVAEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVHVTAAASGD
EQPEVDISDEEFLQFDTSEVPVIVTLTKVGRHYIVDATSEEESQMSSAISVSINRKGHIC
GLTKRGGAGIDPSVISDMISVAQYISEQLINKLDSEISAAEADEDES
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggtaggactctcagttggagaaaagcatttcatacagggtggcattaatcaaaatctc
cgctctgatggtcgaaaacgagatacctatcgacccatttttgttgaaactggagtcatc
cctcaggcaaatggctcggcacgaatcaggatgggtgcaacagaggttattgctagtgtg
aaggctgagcttggaaggccaagtgcattgcagcctgataagggaaaggttgctatattt
gtcgattgtagcccagttgcagaaccaacatttgagggcagaggcggcgaggacctgtca
acagaactttcagttgctcttcagcgttgtctcctaggtggtaaaagtggggcaggtgct
gggattgatctatcatctctagtagttgcagaaggaaaaatttgttgggatctttatatt
gatggccttgttgtcagttcagatggaaatcttttagatgctcttggtgctgcaattaag
gctgctttgagcaatacagggatcccaagagtccatgttacagctgctgcatcaggtgat
gagcaaccagaggttgacataagtgatgaagaatttcttcaatttgacacatcggaggtt
cctgttatagttaccttaacaaaggtggggagacactatattgtagatgctacttcagaa
gaggaatcccagatgagctctgcaatttctgtttccataaataggaaagggcatatttgt
gggttgacaaaacgaggaggtgcaggcattgatccaagtgtgatttctgacatgatatct
gttgcacaatatataagtgagcagctgattaataaattggactctgaaatatctgctgca
gaggctgatgaagatgaatcatga
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