Hevea brasiliensis (rubber tree): 110636104
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Entry
110636104 CDS
T05150
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbr03016
]
110636104
Enzymes [BR:
hbr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
110636104
Transfer RNA biogenesis [BR:
hbr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110636104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
110636104
NCBI-ProteinID:
XP_021641351
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MSSESEAADFNSHTAVGGEDMQLFKDAVRSLPSHVVKDLLSIGVCMRCIFRLFGMHGHVY
SCSSPSSLVMCAILGEPSCPEEHMAVSSLKGDEDKKDTSSSDDSEVEPEICSICLGILQF
IYYDAKGMLVKKRSAISLALSISEQIKKEGNQLDSFSLEVSIPPVIQENEHNIHLYMKRK
YRSELWFEERLSKCISTKEALKFAMANLLEKVLDVKSGPSSCRIRLTYAQTKPSSMVPNL
AAGGEGCKRRKTVANPGFDSVNNKLVDASNECFDFSTTNRNALGESSTNGLEDHESSECI
IFPKDKVNEPCHLVFLYYRTPIYIGGRYLKFSRNVSQTRWIIDDERMGEASVEEIIGGNI
LPACHGDSYKFHAAGREDIDVRMLGSGRPFLVEIQNARQVPSEALVKEIETKINNLNTKL
VAVKNLKMVANEGWTLMHEGEAEKQKQYCALVWISRPLEDQDLQSIASLKDLQILQKTPI
RVLHRRSPLEREKIIHWMKIETIAESSQYFLLHLCTQAGTYIKEFVHGDLGRTCPSIGSI
LGCRAEILQLDVTDVKMDCFLVE
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcgagagtgaagctgcggactttaactcccacacggccgtcggtggcgaggac
atgcaactcttcaaagatgctgttcgttctttgccttctcacgtcgtaaaggacttgcta
tccattggggtatgcatgagatgcatctttcggctgtttgggatgcatggacatgtttat
tcttgctcttctccctcatcgttagttatgtgtgctattcttggagagccatcatgtcca
gaagagcatatggcagtatccagcttgaaaggcgacgaagacaagaaagatacttcttca
tctgatgattcagaagttgagccagaaatatgcagcatttgtttgggtatcttgcagttc
atttactatgatgctaaaggaatgctggtgaaaaaaagaagtgctattagcttagctcta
tcaatttctgaacagataaagaaagagggtaatcagcttgatagcttttctcttgaagtc
tccataccaccagttatccaggaaaatgaacataatattcatttgtatatgaaaaggaag
taccgatcagagctatggttcgaagaaagactttctaaatgcatttctacaaaggaagcc
ttgaagtttgcaatggcaaatctgcttgaaaaagttttggatgtaaaatctggtccaagc
tcttgtcgtatccgtttgacatatgcccaaactaagccatcaagtatggttccaaattta
gcggcaggaggtgaaggttgcaagagaagaaaaacagttgctaatcctggtttcgactct
gtcaataataagttagtggatgctagcaatgaatgttttgatttctctacaaccaacaga
aatgctttaggtgagagttctactaatggtctggaagaccatgaatcttctgagtgcatc
atcttccccaaggataaggtcaatgaaccctgccatttggtgtttctttactacaggaca
cctatatacattggtggaagatacctgaagttctcgaggaatgtgagtcaaacacgttgg
atcattgatgatgaaagaatgggagaagcatctgtcgaggagataataggtggcaacatc
cttcccgcgtgtcatggtgacagttacaagtttcatgctgctggtagagaggatatcgat
gttcgaatgctgggttcaggcaggcctttcctggttgagatacaaaatgcccgccaagtc
ccatctgaggctcttgtgaaagaaatagagactaagataaataacttaaatactaaattg
gttgcagttaaaaatcttaaaatggtagccaatgagggctggactctgatgcatgagggg
gaagcagaaaagcagaagcaatattgtgcgctggtgtggatttctcgcccacttgaagat
caagacttgcagtcaattgcttccctcaaggacttgcaaattttgcagaaaaccccaatt
agggtgcttcaccgtcggagtccattagaacgtgaaaagattatacattggatgaaaata
gaaacaattgctgagagctctcaatattttcttttgcatctatgtacccaggctgggaca
tatatcaaagaatttgtacatggggatctagggcgtacatgtccaagcattggatcaatt
ctaggatgcagagcagagatcctccaactcgatgttactgatgtgaaaatggactgtttc
ctggtcgaatga
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