Hevea brasiliensis (rubber tree): 110636224
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Entry
110636224 CDS
T05150
Name
(RefSeq) small subunit processome component 20 homolog isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hbr03009
]
110636224
Ribosome biogenesis [BR:
hbr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110636224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
TPR_CAND1
NAS
RYDR_ITPR
Motif
Other DBs
NCBI-GeneID:
110636224
NCBI-ProteinID:
XP_021641529
LinkDB
All DBs
Position
Unknown
AA seq
2724 aa
AA seq
DB search
MATPLHAVGVKSLNKSPGRRRFVFKTFSQRIEEVEIDVYRSLDKIKPEPSEGSSFFRDYL
VEWRELNTAEDFISFYEKMMPLVQTLPLVLLHKESILSELLSRLQLKARLSLEPILRLTA
SLSRDLLEDFISFLPRIADSFYSLLKSGADREPEIIEQIFKSWSHILMYLQKYLVKDVVH
VLKVTIKLRYYPEWYIQEFMADATSFLLRNAPKEQLRKGIRKIMFEIVNKPLPARKSGVI
VLLYHIMRGPSSKFHSRADWVLQLLTENSTFNIGGDKFNQGVDTVIEVLTATFKRLCEDL
EPKELNLMWNCLYNRIDDSVNDEDYRHLSCLLSLLISTVQINNGMKISDYQPMIERVRSF
VQKFIVPSSIVVGQDNSEIVDKILQLMLCILDGLKSFNDMSTISSCLLQWTPVFALRNSS
VLTFIRELLEKDPYIIHASRVNILSAMNDLIETSQDEVVYLICSLCERLQKNSLISSFLD
GTSTEGLSRIHGFLQGAICSWIGVINDISHGNLASTSTDEGKLALLWGIICCYPHMIDVR
ARPSSLTDLIDALDCLLMIEDESIAGVSKHTWQSLLGAAISSYYKLGNICGLEETRKILH
LAKTYKSSSHVLSAVADYLDSVYGPIMEADSHCKSYLPEFETEKAVDALGIFADNLCNSD
KAIRVATLRILCHCECHECKMSANDQPPENIMKTEGYQTHPAESHGSYGVNVLQLLLSIE
ATPLSISTSRKVILLISRIQMAISAGKISETYMPILLSGIIGIFYNRFSYLWNPASECLA
ILIRENVALVWGKFVHYFEECLSTFHSPHNKPDGQSAEVPYNSCDLVERFTSFAAPTSDS
TPYATVLSSLLQSLQKIPSVAESRSRQIVPLFLKFLGYNNEDLLSVGSFNSDACKGKEWR
GVLKEWLSLFKLMRNPRAFYRSQSLKDVLLIRFMDENDAEIQMRVLDCLLTWKDDFLIPY
EQHLRNLISSKNLREELTTWSLSRESFLIEEEHRANLVPIIILILVPKVRKLKILASRKH
TSLHHRKAVLRFIAQLDVNEIPLFFASLIKPLHDISKEADSTTNIFWTLPKNSVDGLQPS
NILKYFTLENIMALSWKKKYGFLHVIEDILGSFDELHIRPFLDLLMGCVVRVLQSCISSL
DPAKGTGSSISKSHSFVSLELRNEDSTAVNHALTSSTLKQFKDLRSLCLKIVSLVINKYD
DHDFDCVFWGMFFASVKPLIDGFKLEGSSSEKPSSLFSCFLAMSSSRHLVPLLSRETNLV
PDIFSILTVTTASKAIISCVLKFIENLLNLNEELDDEDNSVKKVLFPNLDKLISSLHCLF
QDDTANKRKLAKYLGETHTRIFKLLSKYIQDQLQSRKFLDILLPLIATRREDSGVFVECL
QIIRDIIPVLGNECTTKILNVISPHLISVELDMRLNICDLLYALAKIDPSVLSVASLLRD
LNATSAIELTGLDYDTIISAYEKIDVDLFYTIQEDHALVLLSHFVYDMTSEELILRNSAY
RSLLSFVEFCALILDGGVKSRYEIHQEITTGSKCCWTKACVRRIINKFLLKHMGNKMKEG
GSVRKEWIELLRDMVLKLPEVENLNSFKVLCSEDAEQDFFNNIIHLQKHRRARAVLRFSN
IISKSKMSEDIMNKVFVPLLFSMLFDEQGGKGEHVKTACIEALASISAQMEWKSYYALLI
RCFREMKINLDKQKIVVRLICSILDQFHFSQNCFSLENKDSADSIVGSDSTETGSFATFH
KCGGNYSAMLPKGSCSVIATEVQACLQKTVLPKMRKLLDCDSDKVNVNINVAALKVLKLL
PMDIMDSQLPSIIHRIANNLKSRMESIRDEARFALAACLKELGLEYLQFIVGVLRATLKR
GYELHVLGYSLHFILLKFLSNPKCGTLDYCLEDLLSVVENDILGDVAEEKEVEKIASKMK
ETRKLKSFETLKIISQSITFKTHGLKLLSPVKARLQKHLTPKVKTKLESMLNHISAGIES
NPSVDQTDLFIFIYGFIEDGINHEDGQGENSSGTEMMPRHRREVNEKTISAGRDNGTKSV
CSHLITVFALGLFHNRMKSVKLDKNNEELLSMLDPFVKLLGDCLSSRYEDILSASLKCLT
QLVRLPLPSLASQTDKIKVTLLSIAQSSVNSNNSLMQSCLKMLTVLLRSTKITLSSEQLH
LLIQFPLFIDLERNPSFVALSLLKAVVNRKLVVPEIYDVMMHIAELMVTSQVDSIRKKCS
QIMLQFLLDYHLSGKYLQQHLDFLLRNLSYEYSTGRESVLEMLHAIIVKFPRNFLDKHAQ
TIFIHLVQCLVNDRDNKVRSMTGTVLKLLIGRASPHLLDSMFDFSLSWYMDEKRQVQSTG
AQVLGLLVEVMNKSFQKHISSILPVSKTILQAAVGVASESPALDLHDEAVPLWKEAYYSL
VLLEKILHHFHDLSFEKDFEDIWEAVCELLLHPHPWLRNISSRLVAIYYATVTKASKESH
EKALGTFFLMRPHRLFMIAVSLCCQLKTQVIDNAVENLITQNLVFTISAIHSLMGKVESV
DPSTFWSTLEQHEQGQFLKAFQLLDARKGKDIFLKVISGVHDQDYGDRCENLQYLLLSNL
IKKMGKIALQKEAIQMKIIFNTFGKISLQIEQDKLQKHAFDMLLPLYKVCEGFAGKVVTD
ELKLLAEEVCKSMRNALGIHNFVQVYSEMRRSIKVKREKRKREEKVMAVVNPMRNAKRKL
RIAAKHRAHKRRKIMTMKMGRWMH
NT seq
8175 nt
NT seq
+upstream
nt +downstream
nt
atggccacgccgttgcatgctgtgggggtcaagtcactgaacaaatcccccggtcgccgc
cgcttcgttttcaagactttctcccagagaatagaagaagttgagattgatgtatatcga
agccttgataaaataaagcctgagccatctgagggttcttcttttttccgggattacctc
gtagaatggagggagttgaatactgcagaggacttcatctcgttttatgagaagatgatg
cccttggtacagacattacctttagtgctattacacaaagaatcaattttgtcagaactt
ctttctagattgcaattgaaagcacggctgtcgcttgagcctattcttcggttaactgca
agtctatctagagatctgttagaggatttcatctcctttttgcctaggattgctgattca
ttttactctcttctcaaaagcggtgctgatagggagccagagatcattgagcagattttt
aaatcatggtctcatattctgatgtatttgcaaaaatatcttgtgaaggatgttgtacat
gtgctcaaggtgacaataaaattaagatactacccagagtggtacatacaagaatttatg
gcggacgcaacatcattcttgctaagaaatgctcctaaagagcaacttagaaaaggcatt
agaaagatcatgtttgaaatagtgaataaaccattgcctgctcgaaaatctggagtcatt
gttttactttatcatattatgagagggccctcatcgaaatttcattcaagagcagattgg
gtattgcagctattgacggaaaattctacatttaatattggtggtgataagttcaaccaa
ggcgtggacacagttattgaagttctcactgctacctttaaaagattatgtgaagatcta
gaaccaaaagagttaaatttgatgtggaattgcttatataacagaatagatgactctgta
aatgatgaagactaccggcatctaagttgccttttgtcactgcttatatcaactgtccag
atcaataatgggatgaaaatttctgattaccagccaatgattgaacgagtaaggtcattt
gttcagaagtttattgtcccttctagcattgtggtgggacaagacaattctgaaattgtt
gacaagattctgcagttaatgctatgcattcttgatgggctcaaaagtttcaatgacatg
tctactatctccagctgtttgttgcagtggactccagtttttgcattgaggaactcaagt
gttttgacatttattagggaactgctggaaaaggacccatacataatacacgcgtccaga
gttaatattttaagcgcaatgaatgatttaatagaaacttcacaggacgaagttgtatat
ctgatttgttcattgtgtgagagactgcaaaagaattctctaatttctagcttcctagat
ggaacatctacagaaggtctttcacgaattcatggttttctccagggggccatctgctcc
tggattggggtgatcaatgatattagtcatggtaatctagcatcaaccagtactgatgag
ggcaagttggctctgctctggggaatcatctgttgctatcctcatatgatagatgtgcga
gcaaggccatcctcgctaacggatttaatagatgcacttgattgccttttgatgattgaa
gatgaaagtattgctggtgtttctaagcatacttggcaaagcctgttgggggctgctata
agttcttattacaaacttggcaatatatgtgggctagaagaaacaagaaaaattttgcat
cttgcaaagacatacaaatcatcctcacatgtgttatctgctgttgctgattatttggac
tctgtgtatgggccaataatggaggcagacagccactgcaaatcttatcttcctgagttt
gaaacagagaaggctgtggatgcattaggcatttttgctgataatttgtgcaactcagat
aaggcaattcgtgttgcaaccctaagaattttgtgccactgtgaatgtcatgaatgtaaa
atgtctgccaatgatcagccgcctgagaatataatgaaaacagaaggttatcagactcac
cctgcagaaagtcatgggtcttatggtgttaacgttcttcagctcctcctctcaattgaa
gcaactcctctttcaatttctacaagcaggaaagttattctgttaatatctagaatacag
atggccatatctgctggaaagatatctgaaacttatatgcccatacttttgagtggaata
attggcattttctataaccgtttcagttatctatggaatcctgcgtctgagtgccttgct
attctgattagggaaaatgttgcacttgtatggggcaaatttgttcattattttgaagaa
tgcctatctacatttcattcacctcataataagcctgatggacaaagtgctgaagtgccg
tacaattcctgtgacttggttgagcgttttacttcatttgctgctcctacatctgatagc
acaccctatgcaactgttctatcctcattactacagtctttacaaaaaattccttctgtt
gctgaatctcgatctcgacaaattgtacctctgttcttgaagtttttgggctacaacaat
gaagatcttctcagtgtgggttcattcaattcagatgcttgcaaaggcaaggaatggaga
ggtgtcctaaaagaatggttaagcctgtttaaactcatgcggaaccctagggccttctat
aggagccaatctttaaaagatgttctgctaatcaggtttatggatgaaaatgatgctgaa
atacagatgagggttcttgactgcctcttaacttggaaagatgattttttaatcccatat
gaacagcatctgagaaacttgatcagttcaaaaaatttgagagaagaactaacaacgtgg
agtttgagcagagaatcttttcttattgaagaagagcacagagctaatcttgtgcctata
attatccttattctggtaccaaaagtgagaaaactgaagatacttgcctctaggaagcat
acaagtttacatcatcggaaggcagttcttcgattcatagctcaacttgatgtcaatgag
attcctcttttctttgcatcgttaataaagcccttgcatgatatttcaaaggaagctgat
agtaccacaaatatattttggacattacctaaaaattctgtggatggacttcaaccatca
aatattttgaagtacttcaccttggaaaatatcatggcactgtcttggaagaagaaatat
ggttttctgcatgtcattgaagatatccttggaagttttgatgaattacatatcagacct
tttctggatctgttaatgggatgtgttgttagggtgctgcaaagctgcatttcaagtctc
gaccctgcaaagggcactggatcttctataagcaaaagtcattcttttgtcagccttgaa
ctgcgtaatgaagacagtactgccgtaaatcatgcactgaccagctcaacgctgaagcag
ttcaaggatttgaggtctttgtgtctgaaaattgtgtcccttgttatcaataagtatgat
gatcatgattttgattgcgtattctggggcatgttctttgcatcagtaaaacctttaatt
gacggtttcaagctggagggttccagtagtgagaaaccaagttcactattctcatgcttt
ttggctatgagtagcagtcgccaccttgtaccgctattgtctagggaaacgaatctggtt
cctgatattttctcgattctaactgtcactactgcttccaaggctattatatcttgcgtt
ctcaagttcattgagaacctgctgaatctcaatgaagagttggatgatgaagacaattca
gtgaagaaggttctatttccaaaccttgacaaacttatcagtagcttgcactgtctgttt
caggatgatactgcaaacaagaggaaattggccaaatatcttggggagacgcatactaga
attttcaaattgttgtcgaagtatatacaagatcaattacagtcaaggaagtttttggat
atcttgcttccactgatagcaacaagacgtgaagattctggtgtctttgttgaatgcttg
caaattattcgagacataatacctgtattaggaaatgagtgtactaccaaaattctgaat
gttatctctccacatcttatttctgttgagctggatatgcggttgaacatctgtgatctg
ctttatgctcttgctaaaattgatccttctgtactctcagtggcaagccttcttcgtgac
ttgaatgcaacctctgcaattgaattgactggccttgattatgacaccataatcagtgca
tatgaaaagatagatgttgatttattctataccatccaagaagatcatgcattagttctc
ttgtcacattttgtgtatgatatgacatcagaagaattaattctaaggaatagtgcttac
aggtcattgctttcttttgttgaattttgtgccttaattcttgatggaggggttaagagt
cgatacgaaatccatcaagagatcacaacaggcagcaagtgttgttggacaaaagcatgt
gttcggcgcataataaacaagtttcttttgaagcatatggggaacaaaatgaaggaggga
ggttctgttaggaaggaatggattgagttattacgagatatggtgttgaagcttccagag
gtggaaaatctcaattccttcaaagtgctgtgctctgaggatgctgagcaagattttttc
aacaatattattcacttgcagaagcatagaagggcaagggcagttttacgctttagtaat
attatcagtaaaagtaagatgtcggaggatatcatgaataaagtgtttgttccactcttg
tttagtatgttgtttgatgaacaaggtggaaagggagaacatgttaaaactgcatgcatt
gaagctcttgcttcaatatctgctcagatggaatggaagtcttattatgccttattgatt
agatgctttcgagaaatgaagataaatctggacaagcagaagattgtagtgcggcttatt
tgctctatattggaccagttccatttttcacaaaattgtttcagtctagaaaacaaagac
tctgcagatagcattgtaggctctgatagcactgaaacaggttctttcgctacatttcac
aaatgtggtggtaattattcagctatgctgcctaaaggtagttgttccgtaatagccact
gaagtacaggcatgtcttcagaaaactgtgctccctaagatgcgaaaattactggattgt
gattctgataaggtcaatgttaacatcaatgtagctgcactgaaagtactgaagttgctt
ccaatggacataatggactcgcaacttccaagtatcattcatcgcattgcaaacaattta
aagagccgtatggaaagcatccgtgatgaagctaggtttgctttggctgcttgtttaaag
gagcttggcctggaatatttgcagtttatagtcggggttttgcgagctaccttgaagcga
ggatatgagctccatgtgttgggctatagtctccattttattttgttgaagtttctttca
aatcctaagtgtgggacgttggattattgtttggaagacctcctttctgtggtagagaat
gatattcttggagatgttgctgaggagaaagaagtagaaaaaattgcttctaaaatgaaa
gaaactaggaagctgaagtcctttgaaaccttgaaaataatttcccaaagcataacattc
aaaacccatggcttgaaattactttcaccagttaaagctcgcctgcagaagcatctaaca
cccaaagtgaaaaccaaattggaaagtatgttaaatcacatatcggctggtattgaaagt
aatccatcagttgatcagactgatctatttatttttatatatgggtttattgaagatggg
atcaatcatgaggatggtcaaggtgagaattcttctggtacagagatgatgcctcgccac
agacgagaggttaatgagaaaacaatttctgcaggcagagataatggaactaaatctgtg
tgctctcatctcattactgtttttgctcttgggctattccacaaccgcatgaagagtgtg
aaattggataaaaataatgaagaacttctatcaatgttggatccctttgttaaactgctt
ggtgactgcttgagttctaggtatgaagacattttgtctgcatcccttaaatgccttaca
caacttgtgaggctacctctgccatcccttgcatctcagacagataaaataaaggtgaca
ttactgagtattgcccaaagttctgtgaactccaacaattctctgatgcaatcatgtcta
aaaatgttaactgtgctcctgcgaagtactaagattaccctttcctcagaacaactgcat
ctgctaattcagtttccactgttcattgatcttgagcggaatccctcttttgtggccctc
tcacttctaaaggcagttgttaatcgcaagctggttgttcctgagatatatgatgttatg
atgcatattgcagagctaatggttacaagccaagtggattcaattcgcaagaaatgcagt
cagattatgttgcaatttttactagattatcatctttctggaaaatatttacaacaacat
ttagattttctgctgaggaatttgagttatgagtattcaactggaagagaatctgtactt
gaaatgctccatgctataatagtcaaatttcccaggaactttctggataaacatgcacaa
acaatatttatccatttggtgcaatgtttagtcaatgaccgtgataataaagtccgttcc
atgaccggtacagttttaaagcttttgattggacgtgcaagtcctcatttgctagattcc
atgtttgactttagtctatcttggtatatggatgaaaagcggcaagtccagagcactggt
gcacaggtactgggattattggttgaggtcatgaataaaagctttcaaaagcatatcagc
agtatattgcctgtgagcaaaaccattttgcaggctgctgtgggtgttgccagtgagagt
ccagcgctagatcttcatgatgaagctgttcctctctggaaagaggcatattattcgtta
gttttgttggagaagattctacatcattttcatgatctcagctttgaaaaggattttgag
gatatatgggaagcagtatgtgagttgctcttacacccacacccatggttacgcaacata
tcaagtcgccttgtggcaatttactatgctactgtgactaaggccagcaaagagagtcat
gaaaaagcattgggaacatttttccttatgaggccacataggctttttatgatagctgtt
tccctttgctgccagctaaaaacacaagtcattgataacgctgttgaaaacctgattaca
cagaatcttgtctttacaatttctgctattcattctctgatgggaaaagtggaatctgtg
gatccttctactttctggtctacgcttgaacagcatgaacaaggccaatttcttaaagcc
tttcagttgcttgatgcaagaaaaggaaaagacatctttttaaaagttatatctggtgtc
catgaccaagattatggagaccgttgtgagaatctccaatatttgctcctctctaatttg
attaaaaaaatggggaaaattgctcttcaaaaggaggctattcagatgaaaatcatcttc
aatacttttggaaagatttctttacaaatagaacaggacaagttacagaagcatgcattt
gacatgctgttaccgttgtataaagtttgtgaaggatttgctgggaaagttgtcactgat
gaattgaagctgctagcggaagaggtttgcaaaagtatgcggaatgctttgggcatccac
aattttgtacaggtttatagtgagatgaggagaagtatcaaggtgaagagagaaaagagg
aagcgagaggaaaaggtcatggctgttgtgaacccaatgcggaatgctaagaggaagcta
cggattgcagcgaagcatcgtgcacacaagagaaggaagataatgacaatgaaaatggga
agatggatgcattaa
DBGET
integrated database retrieval system
