Hevea brasiliensis (rubber tree): 110636254
Help
Entry
110636254 CDS
T05150
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110636254
Enzymes [BR:
hbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110636254
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
110636254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
Helicase_PWI
T2SSE
Tc-R-P
Motif
Other DBs
NCBI-GeneID:
110636254
NCBI-ProteinID:
XP_021641584
LinkDB
All DBs
Position
Unknown
AA seq
2098 aa
AA seq
DB search
MLMQLPRLTNSLRDPFDVDQAYLQRKIILQKHLKHSNTANSLNESELARKIVDRWEEAST
EVRQAYKHFIGAVVDLIDREVPSEEFRVVALTAYHLFGGPGPGEEDNYHSNILKKKSELQ
KLTGHAVSDANIQRVATLAQRLSSLQPTSPESALVLESHVNGSGSDLEFGADLAFQTPAR
FLVDVTLEDEEGEETTGSSSLFQDGWQDHNDCGQNHSADDGGKFNLSWLRDACDQIVRES
TSQLSQDDLAMAICRVLDSDKPGEEIASDLLDLVGDSAFETVQDLITHRKELVDAIRHGW
SVLKSDKMASSTQSRMPSYGTQVTVQTESERQIDKLRRKEEKRNRRGTEHGVDNDASAAS
FSSLLQASERKNLLDNLIGAGPGPHALSVTALPQGTVRKHYKGYEEVVIPPTPTAQMKPG
EKLIEIKELDDFAQAAFHGYKSLNRIQSRIFQTVYYTNENILVCAPTGAGKTNIAMISIL
HEIGQHFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNMVVRELTGDMQLSKNE
LEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQV
ESTQTMIRIVGLSATLPNYLEVAQFLRVNPETGLFFFDSSYRPVPLAQQYIGISEPNFAA
RNELLNEICYRKVVDSLRQGHQAMVFVHSRKDTAKTAEKLVEIARKYDDLELFKNDAHPQ
FSLIKKEVVKSRNKDVVELFEFAVGIHHAGMLRADRVLTEQLFSDGLLKVLVCTATLAWG
VNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAY
YLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRQNPLAYGI
GWDEVIADPSLSLKQRALITDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSV
ETYNEMLRRHMNDSEVIDMVAHSSEFENIVVREEEQNELEMLLRMSCPLEVRGGPSNKHG
KISILIQLYISRGSIDTFSLVSDAAYISASLARIMRALFEICLRRGWSEMSLFMLEYCKA
VDRQIWPHQHPLRQFDKDLSAEIMRKLEERGADLDRLQEMEERDIGALIRYPHGGKLVKQ
YLGYFPWIQLSATVSPITRTVLKVNLLITPDFIWKDRFHGAAQRWWILVEDSENDHIYHS
ELFTLTKRMARADPQKLTFTVPIFEPHPPQYYIRAVSDSWLHAEAFYTISFHNLALPEAR
TMHTELLDLKPLPVTSLGNTTYEALYNFSHFNPIQTQIFHVLYHTDTNVLLGAPTGSGKT
ISAELAMLRLFNTQPDMKVIYIAPLKAIVRERMNDWRKRLVSQLGKEMVEMTGDYTPDLM
ALLSADIIISTPEKWDGISRNWHTRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYI
SSQTERAVRFVGLSTALANAGDLSDWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKYYCP
RMNSMNKPAYAAICTHSPIKPVLIFVSSRRQTRLTALDLIQFAAADEHPRQFLSMTEEAL
QMVLSQITDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLP
AHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKF
LYEPFPVESSLKEQLHDHINAEIVTGTICHKEDAVHYLTWTYLFRRLMVNPAYYGLENAE
PETLSSYMSRLVQNTFEDLEDSGCIKMNEDNVESMMLGMIASQYYLSYMTVSMFGSNIGP
DTSLEVFLHILSGASEYDELPVRHNEENYNEALSQRVRYMVDKNRLDDPHVKANLLFQAH
FSQLELPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLLSSITCMHLLQMVMQGLWFEK
DSSLWMLPCMNTDLLSSLNKKGISTVQHLLDLPKATLQATIGNFPASRLYQDLHHFPCIK
TKLKLQKTDTDGKQSLSLNIKLEKTNSRKSTSRAFVPRFPKVKDEAWWLVLGNSSTSELY
ALKRVSFSDHLVTRMDIPSSLTTLQGTKLMLISDCYLGFEQEHCIEELVKSQEMGTAV
NT seq
6297 nt
NT seq
+upstream
nt +downstream
nt
atgctaatgcaattacctcggttgacaaactctctcagagatccattcgacgtcgatcaa
gcctatctccagcgcaagatcatccttcagaaacatctcaagcatagcaatactgcaaat
tcacttaatgaatcggagcttgcaaggaagatagttgatcgatgggaagaagcctcaaca
gaagtgagacaagcttacaagcattttattggggcagtagtggacttaatagacagagag
gtgccatctgaagagttccgtgtggtggcactcactgcctaccatctatttggaggacca
ggaccaggagaggaagataattatcattccaatattctcaagaagaagtcagaattgcaa
aaacttactggtcatgcggtttcagatgctaacatccagagagttgccaccttagcacag
aggctttccagtttgcaacctaccagccctgagtctgcacttgtcttagagagccatgtg
aatggaagcggcagtgatctagaatttggggctgaccttgctttccaaactccagccagg
tttctagtggatgttactttggaggatgaggagggagaggaaaccactggatcttcttct
ttgtttcaggatggatggcaagatcataatgactgtggccagaatcattctgctgatgat
ggtgggaaattcaatttaagttggttaagagatgcatgtgaccagatagttagagaaagt
acttcgcagctttcccaagatgatctggcaatggctatatgccgtgtacttgattcagat
aaacctggcgaggagatagccagtgacttgttggatcttgttggggatagtgcatttgaa
actgttcaagaccttataacgcatcggaaggaacttgttgacgcaatccgtcatggatgg
tcagtactgaaatcagataaaatggcatcaagcactcaatcacgtatgcccagttatggc
actcaggttaccgtccaaacagaatcagaaaggcagattgataaacttcggcggaaggag
gaaaagcgaaatagacgtggaacagaacatggggttgataatgacgcatcagctgcaagt
ttttcttctttacttcaagcaagtgagaggaaaaatctgttggacaatctgattggcgct
ggcccagggccccatgcattatcagtaactgctctgcctcaaggtactgtcaggaaacat
tacaagggctatgaggaagttgtcatccctccaacaccaactgcacaaatgaaacctgga
gaaaagctgattgagataaaggagttagatgattttgctcaagctgcatttcatggatac
aaatcattgaaccgaatccagagccggatatttcaaactgtttattacactaatgagaat
atacttgtttgtgcgccaacaggagctggcaaaacaaatatagctatgatttctattctg
catgagattggacagcacttcaaggatggttacttgcacaaagatgaatttaagatagtt
tatgttgctcctatgaaggcattagctgcagaggtcacatcaacatttagccatcgttta
tctccgctgaatatggttgtgagagaacttactggtgacatgcagctctctaagaatgaa
cttgaagaaactcagatgatagtgacaacacctgagaaatgggatgtcattactcgtaaa
agcagtgacatgtcactttcaatgctggtgaagctcttaattattgatgaagtgcatctt
ttgaacgatgatagaggccctgtgatagaagcacttgttgctaggacactgcgccaggtg
gagtcaacacagacaatgatacgcattgtaggactttcagccactttacccaattatttg
gaggttgctcaatttcttagagtgaatccagagacaggcctcttcttctttgattctagt
tatcgtcctgtgcctcttgcacaacagtatattggaattagtgagccgaactttgcagct
cgcaatgagttattgaatgaaatttgttataggaaggttgttgattcattgaggcaaggt
catcaggcaatggtttttgttcattcgcgaaaggatacagcaaaaacagctgagaaacta
gttgagattgctcgaaagtatgatgatttggagctctttaaaaatgatgcacatcctcaa
ttttccttgattaagaaagaggttgttaagtctagaaacaaggatgttgttgaacttttt
gaatttgctgttggcattcatcacgctgggatgttacgtgctgatagggttttgactgag
caacttttctctgatggactcttgaaggtacttgtttgcacagcaactttggcatggggt
gtaaatctgcctgctcacactgttgtgattaaggggacccaattgtatgatcctaaggct
ggtgggtggcgagacctaggcatgcttgatgttatgcagatctttggaagggctgggaga
cctcaatttgacaagagtggtgaaggcattataatcacgtctcatgacaaactggcctac
tatctaagattgctgacaagtcaacttcccatagaaagtcagtttattagctccttaaaa
gataatttaaatgcagaagtggcattgggtactgtcactaatgtcaaggaagcctgtgca
tggctcgggtatacctaccttttcatcaggatgaggcagaatcctttggcatatggtatt
ggatgggatgaggttattgcagatccttctttgagtttaaagcagagagctcttataaca
gatgctgcacgtgcacttgacaaagctaaaatgatgcgttttgatgagaaaagtggcaac
ttctactgtacagagcttggccgcatagcaagccacttctatatccaatattctagtgtt
gaaacttacaatgagatgttgagacgtcatatgaatgatagtgaggttatcgacatggtt
gcccattcttctgagtttgagaatattgttgttagagaggaagagcagaatgagcttgag
atgttgttgcgcatgtcatgccctcttgaagttaggggtggtccttccaataaacacgga
aaaatttcaattctcattcagttgtacatatctcgcggctcgattgatacattttcgttg
gtctctgatgctgcatacataagtgcgagcttggctcgaatcatgcgtgcattatttgaa
atttgtttgcgcagaggctggagtgagatgtccttattcatgttagaatattgcaaggct
gtagatcgccaaatttggcctcaccaacatccacttagacaatttgacaaggatctttca
gcagaaataatgcggaagcttgaagaacggggtgctgatttagatcgtctacaggagatg
gaggaaagagatattggagcacttattcgttatccccatggagggaagttggttaagcaa
tatttagggtacttcccatggatccagttatcggcaaccgtaagtccaataaccaggact
gttttgaaggtgaatttgctcataactccagacttcatttggaaagatcgttttcatggt
gctgcacaacgttggtggattcttgttgaggattctgagaatgatcatatctaccattca
gagcttttcactttgacaaagcgcatggcacgggcagatcctcagaagctcacatttact
gtgccaatttttgaaccacatccaccacaatactacattcgtgctgtttctgattcttgg
ttgcatgcggaagctttctacactatttcattccataatctagcactgccagaggctcgt
actatgcatactgaacttctagatctaaaacctctccctgtgacgtcacttggaaacact
acatatgaagctttatacaatttttcacattttaatcctatacaaacacagatttttcat
gtcctttatcacacagacaccaatgttttgttaggagctcccactggtagtgggaaaact
atatctgctgaacttgctatgcttcgtctcttcaatactcagcctgatatgaaggttatt
tacatagcacctttgaaggctattgtacgagagagaatgaatgattggagaaaacgtctc
gtctctcagcttggaaaagagatggttgaaatgactggagattatactccagatttgatg
gccctcttgtcagcagatatcatcatatctacccctgagaagtgggatggtattagtcgt
aattggcatactcgaagctatgtgacgaaggttgggcttatgattttggatgagattcac
ttattgggtgctgatcgtggacctatccttgaggttattgtttcaaggatgagatacata
tcatcccaaacagagcgggcagtacgttttgtaggtctttcaacagctttggcaaatgca
ggagatttgtctgattggttgggagttggtgaaattggacttttcaatttcaagccaagt
gtaaggcctgtgcctctggaagtacatatccagggatatcctgggaagtattactgccca
aggatgaatagcatgaacaaaccagcatacgctgcaatatgtacccattcacctataaag
ccagtactcatatttgtatcgtctcgtcgccaaacgaggcttactgcacttgaccttatt
cagtttgcagcggcagatgagcatccaaggcaatttctgagtatgacagaagaagcattg
cagatggttctttctcagatcactgatcagaacctgagacacaccttacaatttggcatt
gggttacaccatgcaggactaaatgacaaagacagatctctggttgaggaactttttgca
aacaacaagatccaggtgttagtgtgcacaagcacacttgcttggggggtgaatcttcct
gctcatctggttattatcaagggaacggaatattacgatggaaagacaaagagatacgtt
gattttcccatcacagatatcttgcaaatgatgggtcgtgcaggccgcccacaatatgat
cagcatggaaaagctgtcattcttgttcatgaacctaagaagagcttctataaaaagttt
ttgtacgaaccatttcctgttgagagtagtctaaaggagcagctgcatgatcacatcaat
gcagagatagttactggcacaatttgccataaagaggatgcagtgcattaccttacatgg
acttacttattccgtagactgatggttaatcccgcctactatggtctagagaatgcagaa
cctgaaactctgagttcttatatgtctagattagtgcaaaacacatttgaggatctggaa
gacagtgggtgcatcaagatgaatgaagacaatgtggagtctatgatgttgggcatgata
gcatcacagtattaccttagctacatgactgtttcaatgtttggatcaaatatagggcca
gatacatctcttgaagtgtttttgcatattctttctggtgcttctgaatatgatgaactt
cctgtgcggcataacgaggaaaattataatgaagcattgtctcagagagttcgatatatg
gtggacaagaatcgcttagatgatccacatgtcaaagcaaatctgctatttcaggctcat
ttttcccagttagagttacccatcagtgattatgtgacagatttgaaatcagtgttagat
caaagtatacgtatcatacaggccatgatagatatttgtgccaatagtgggtggctttta
agctcaattacttgcatgcatcttttgcaaatggtcatgcagggtctgtggtttgaaaaa
gattcttccctgtggatgttgccatgcatgaatactgatcttttgtcttcattgaacaaa
aaaggaatctccactgtgcagcatctgttggatcttcccaaggcaactttgcaggctacg
attggaaattttcctgcttcaagattgtatcaggatctgcatcattttccctgcattaaa
acaaagttaaaacttcagaagacggacactgatggcaaacagtctctttccctgaacatc
aaattggagaagacaaactccaggaaaagcacatcaagggcttttgtccctcgattccct
aaggtaaaagatgaagcatggtggttagttcttggcaactcatccacctctgaactatat
gctctgaagagagtttctttctctgatcacttggttactcgcatggatataccatcatcc
ttgaccactttacaggggacaaaattgatgttaatttctgattgttaccttggttttgaa
caagaacattgcattgaagaactagtcaagtctcaagaaatgggaacagccgtttga
DBGET
integrated database retrieval system
