Hevea brasiliensis (rubber tree): 110636446
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Entry
110636446 CDS
T05150
Name
(RefSeq) uncharacterized protein LOC110636446 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110636446
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110636446
Surveillance factors
Other surveillance factors
110636446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
110636446
NCBI-ProteinID:
XP_021641848
LinkDB
All DBs
Position
Unknown
AA seq
1686 aa
AA seq
DB search
MADGKLTLPDDLISSKFPDEHTSNAKDEAWGGGIGEDKPLMSLLDESKDQVISDSGIPLS
PQWLYTKPVDAKIPTAGASGEMRAPNSLSQGNCLDNNLKDSWQLDGQDKKDWRKISADVE
SSRCWREEERETSLLGRRDRRREDRRADAISTRDIAESRVLSSSDRWHDSNSRNSGHESW
RDSKWSSRWGPEEKEKDSWNEKRTDVEKEDTYTDKQSFVTGSYTTLERENDSREKWRPRH
RMEVNSGGMRSAPGFGPERGRMEASNIRFAAGRGRSNSNGGKSIGSHPSASAIGSIPLDK
NQSYCYPRGKFLDIYRRQQTLQSFNTIPDGMENVPSVTTEVAIKPLSFVAPDAEEEAVLG
DIWLGKNKSSGGLHNSLGDRNGGSKDDIRGFAEVTSEGNLSSTVNTDEIFESFRKFAVND
SDDGSGADVSDTSIMEEVYSSKEGKEKLRTAIGRALSDGLMPAVPKKENSSSSQEIGPSN
NIVELKTLDNQQVADLANMNHLESEHIKSATSFEIGSQLPDDPSSLFDFPSGQQSQSDNQ
FALKSNDEVHLLRSVVIPEELSLCYLDPQGVIQGPYLGIDIVTWFEQGYFGTDLPVCLSD
APDGSPFLELGEVMPHLKVKLGSVSSTSKLSDTVGGSLEESIPLAFATDFEGSSAVRADQ
QQASSASSRFEDPSNVIGQSSVYNNSFRSGMKCSDDQRLEHFVTRDEEVLPGRPGSNSGN
PSMKLAADIPNSVSNPSSDPSLASEFLGTHQDENPHPFGLLMSELIGNSQLRRVQSSNIS
SGMGDQGQTIDPCSEGAIAFCNQSSFGAVVDQPPYMETWSDDYSKNTLTNPSIHMDSKDV
HLSHREQDFSDFDLQHLILQNLQKEQVQPQNNLSTHSLSHGTRLGIEEIPSNFLKLQFQQ
QQQLELQQQQRLELQQQQWHLEVQQQQRQLEIQQRQRQLELQLQRQLEIQRQRQLELQQQ
RQLEFQQQRQLEFQQQQRQLEFQQRQWQLELQKQQQLLQQQLRHQQMELLLQQQEKQQQQ
LVLERMLQHQMSDLGYRRSKVDPLMENLLDQVQFRMQLPELQQSSHPSRHLDPSLEQIIR
AKVGLNSLQEPQADFLDLLQEKHGNVLPSNQFHFQEERLQAQQLSLALKQQLGMDGKRHL
SGPWSVDEAGHLSRNGGALNQSQSLGFDTSDFYQQRRLSSPEEHLSHLKWKHALQEQCQH
GLYEPVVIPGIKLDNVNDCPQDPNSTEHLYMQPVDQLGSFSSGMPFPFKQISDDFYGSPP
AALAFLPGKQGKLEKSGIKGGMQQLHLETQQQSKVSEVAANSSICAPTGGDEENSKRLLM
DCQKLGLQCIRSSETDYQYLISSSEPQNALCLIKDSRFSNLPLNHNLDQEAAMNLSFTKG
PQILNSTSLLQDNLVSAALSGQNGERLLSKSNSGALIEEQTFLSGARDPSHTSYVDARFI
GKSTLDEDLPELERKGSIYGSKAMVPMCRSASQIEDNLVEQAEAATDLGRIPSRHSLLSI
AGGNQGIYSCKMGNNISSGGEVSNDSVPSIPTKGVDNTLHKRLPVSRGLSSEDGLPDLAS
ASNVKQRSTMNLPTSNEKRHLSEGNVAAASVGEMQASGKKEMRFRRTSSYSDATVSETSF
IDVLKKSVLSEADAANVAALESSDGSQAAQSAKKKGKKGRQIDPALLGFKVSSNRIMMGE
IQRLED
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgggaagcttactctgcctgacgatctcatctcatccaagttccctgatgaa
cacacatccaacgccaaagatgaagcctggggtggaggaattggtgaggacaagccactg
atgagtttgcttgatgagtcaaaagatcaagtaatttcagatagcggcatacctctttct
ccacaatggctttatactaaacctgttgatgctaagataccaactgctggagcatcaggg
gaaatgcgtgcacctaattctctgtcccaggggaactgccttgacaacaatttgaaagat
agttggcaattagatggccaggataaaaaagactggaggaaaatttcagctgatgtagaa
agcagccgttgttggcgtgaagaggagagagagacaagtttactgggtagaagagatcgt
aggagagaagatcgtcgtgctgatgccatatcaacaagggacatagctgagagcagagta
ttgtcttcttcagatcgttggcatgatagtaatagccgtaattctgggcatgaatcttgg
agagacagcaaatggtcatcaaggtggggtcctgaagaaaaagagaaggattcttggaat
gagaagaggacagatgttgagaaggaagatacttacacagacaagcaatcttttgttact
ggaagctacacaactttggagcgagagaatgactctcgagagaagtggaggcctcgccat
cgcatggaagttaattctggtggaatgcgaagtgcaccaggatttgggccagaaagagga
cgcatggaagcatcaaatattcgatttgctgcaggaagaggaaggtcaaatagtaatggg
ggcaaatcaattggaagtcatccttctgcttctgctattggatctattcctttggataag
aatcaatcatactgctatccaaggggaaaatttctggacatttaccgaaggcaacaaact
cttcaaagttttaataccatccctgatgggatggagaatgtaccctcagtaacaacagaa
gttgctattaagccattgtcttttgttgcacctgatgcagaggaagaggctgtacttgga
gatatatggctggggaaaaacaaaagcagtggagggttacacaattcacttggtgacagg
aatgggggatcaaaagatgatatcagaggctttgctgaagtgactagtgaggggaatctg
agttctacagttaacactgatgaaatttttgaatcttttagaaagtttgctgttaatgat
tctgatgatggtagtggagctgacgtgtcagatacatctataatggaggaggtatattct
tcaaaagaaggcaaagagaagcttagaacagcaattggtagagctttgagtgatggcttg
atgcctgctgttccaaagaaagagaattccagtagttcccaggagattggccccagtaac
aatattgtggaattgaaaactcttgataaccagcaagtggcagatttggctaatatgaac
catctagagtcggaacatatcaagtcagctacttcttttgaaattggtagtcagcttcct
gatgacccgagttctctatttgattttccatctggacagcaaagtcaaagtgataatcaa
tttgctttaaagagcaatgatgaggtacacctattgagaagtgttgtcattcctgaggag
ctatctttgtgctatcttgatcctcaaggggtgatacaggggccatatctggggattgat
attgtcacatggtttgagcaagggtattttggaactgatctacctgtttgcttgtcagat
gctcctgatggatcaccttttcttgaacttggtgaagttatgccacatctaaaagttaaa
cttggatctgtttctagcaccagtaagttatctgatactgttggaggcagcttggaagag
agtatacctcttgcttttgctactgactttgaaggtagttctgctgttagagcagaccaa
caacaggcttcatcagcttcatctagatttgaggatccctcgaatgttattggtcagtca
agtgtttacaataacagttttcgctctgggatgaagtgctctgatgatcaaagattggaa
cattttgtcactcgggatgaagaagttcttcctggaaggcctggaagtaacagtggtaac
ccttcgatgaagcttgctgcagacattccaaattcggtttctaatccttctagtgaccct
tcccttgcgagtgaattcttaggaactcatcaggatgagaatccgcatccatttggccta
ttgatgtctgagctcataggtaactctcagctgaggcgtgttcaatcatcaaatatatct
tcaggcatgggtgatcagggtcaaactatagatccttgctcagaaggagctattgctttc
tgcaatcagagctcttttggtgcagtggttgatcaacctccttatatggagacatggtct
gatgattatagcaaaaatactctcactaaccctagcattcatatggattcaaaagatgtt
cacttatctcacagggagcaagacttcagtgattttgacctgcagcaccttattttacag
aatttgcaaaaagaacaagttcagccacagaataatttatctacacattccctctcacat
ggcaccagattgggcattgaagaaattccttctaattttttgaaactgcagtttcaacaa
cagcagcaattagagcttcaacaacaacagagattggagcttcaacaacagcagtggcac
ttggaggttcagcagcagcaacggcagttggagattcagcagcggcaacgacaattggag
ctccagctgcaacggcagttggagattcagaggcagcggcagttggagcttcagcagcag
cgtcaattagagtttcaacagcagcgtcaattagagtttcaacagcagcagcggcagttg
gagtttcaacagcggcagtggcaactggaacttcaaaagcagcagcagttactccagcag
caacttcgtcaccagcaaatggagttgctgctacagcagcaagaaaaacaacaacagcag
ttggttcttgagcgtatgctgcagcatcagatgtctgatcttggttatagacggtcaaaa
gtggatcctctgatggagaacttgcttgatcaagttcagttcagaatgcagctgccagaa
ctgcaacagagttctcatccttctagacaccttgatccatcactggagcaaataatccga
gctaaggttggattgaattctcttcaagaaccacaggctgatttcttagacctattacag
gaaaaacatggaaatgtactcccttccaaccagtttcattttcaggaagaacggttgcag
gcacaacaattatctttggcactgaaacagcagttaggaatggatgggaaaagacatctc
agtggaccatggtctgttgatgaagcaggtcatctttctcggaatggtggtgctcttaac
cagtctcagtctttaggatttgatacttcagatttctaccagcagcggaggctttcctca
ccagaggagcatctaagccatcttaaatggaaacatgctttacaggagcagtgtcaacat
gggctttatgaacctgttgtaatccctgggataaagttggataatgtaaatgattgtcct
caagatcccaattcaacagaacatctctacatgcagcctgtcgaccaactcggttctttc
tcttctggtatgcctttcccgtttaaacaaatttcagatgatttttatggttctccccca
gcagcattggcatttctccctggaaaacaagggaagctggaaaagagtgggattaaagga
gggatgcaacaactgcatcttgaaactcagcagcagagtaaggtttccgaagttgccgca
aactctagtatttgtgcaccaactggaggtgatgaggaaaactcaaagagacttttgatg
gattgccaaaaactgggtcttcaatgtattcggtcgtcagaaactgattatcaatatctt
atatcatcttctgagcctcagaatgccttatgcctgatcaaggattcgcgcttttcaaat
cttcctctcaatcacaacctagatcaagaagctgctatgaacctttcatttacgaaaggg
ccacaaattttgaattcaacttctctattgcaagataatctggtttctgctgctttgagt
ggtcaaaatggtgaaagattgctctcaaagtcaaattctggagcactaattgaagaacag
acattcttgtcaggcgcaagagatccttctcatactagttatgtggatgccagatttatt
ggtaaatcaacattggacgaagacttgccagaactggaaagaaagggaagtatatatggg
tccaaagctatggttccaatgtgcaggtcagcttcacaaattgaagacaacttggttgag
caggcagaagctgcaacggatttggggaggataccaagcaggcatagtttgctaagcatt
gctggcggaaatcaaggcatctacagctgcaagatgggaaacaatatatcatctggaggg
gaggtttctaatgatagtgtaccttctataccaaccaaaggggttgataatactttacat
aaacgtctgcccgtatcacggggattatcttccgaggatggtttgccagacttggcctcc
gcttcaaatgtcaagcagagaagcacaatgaaccttccaacttctaatgaaaaaaggcat
ttgtctgaggggaatgtagcagcagcctcggttggtgaaatgcaggcatctgggaagaaa
gaaatgcgttttaggaggacctcttcttacagtgatgctactgtgtcagagacatcattt
atagatgtgcttaaaaaatcagttctttctgaggctgatgcagctaatgtggctgctctg
gagtcatctgatggttcacaagcagcacaaagtgcgaaaaagaaaggaaagaagggaagg
cagatagatcctgctcttcttggcttcaaggtttccagcaaccgtatcatgatgggtgag
atacaacgcctggaagactaa
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