Hevea brasiliensis (rubber tree): 110636879
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Entry
110636879 CDS
T05150
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03030
DNA replication
hbr03420
Nucleotide excision repair
hbr03430
Mismatch repair
hbr03440
Homologous recombination
hbr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110636879
03420 Nucleotide excision repair
110636879
03430 Mismatch repair
110636879
03440 Homologous recombination
110636879
03460 Fanconi anemia pathway
110636879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hbr03000
]
110636879
03032 DNA replication proteins [BR:
hbr03032
]
110636879
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110636879
Transcription factors [BR:
hbr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110636879
DNA replication proteins [BR:
hbr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110636879
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110636879
MMR (mismatch excision repair)
110636879
DSBR (double strand breaks repair)
HR (homologous recombination)
110636879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
OB_MEIOB_N
DUF223
zf-like
Motif
Other DBs
NCBI-GeneID:
110636879
NCBI-ProteinID:
XP_021642439
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MPVNLTPNAIAMINGGDVNLKPLVQVVDIKQIGSAQERYRLLISDSVSTQHAMLATQLND
RVKNGFVKKGSVIQLIDYICSDVQKRKIIVVLNLETIIPDCEIIGNPKLFIDMTAQKALP
NGNSIQSAGFGYNNPSAQNYGNNMQSFQPPLSAQKQGSTVHSFRPPLTSQNHGNNMQSFQ
STLSAQNHGNNVQSFQPTVQPPYRPPPSYRNHGAIMKNEAPARIIPIAALNPYQGRWAIK
ARVTAKGDLRRYNNARGDGKVFSFDLLDSNGGEIRVTCFNAVVDRFYDVIEVGRVYLISK
GSLKPAQKNFNHLNNEWEIFLEATSIVDLCPDEDGSIPQQQFSFKSISEIENAENNAILD
VIGIVISVCPSVPILRKNGMETQRRILNLKDSSGRSVELTLWGDFCNKEGQKLQEIVDSG
AFPVLAVKAGKVSDFSGKSLGTISSTQLFINPDIPEAHGLKDWFDGGGHIAASLSISRDI
MPGGSKNEIRKTVSQIKFEGLGRSDRPDWVTVSARITFVKTDTFCYTACPLMIGDRQCNK
KVIRSGNSRWQCDRCNQEFDECDYRYLLQVQIQDHTGLTWVTAFQEAGEEILGYPAKELY
LMKYELQDDTRFADIIRGRLFHQYLFRLKIKEEMYGDEQRVKMTVVKADKVNYSSESRYL
LDFISKYPRY
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgaatttgacgccgaacgctatagcgatgataaacggcggcgatgtgaacttg
aagcctttggtgcaggttgttgatataaagcagataggcagcgcgcaggagaggtatcgc
ctcctcatttccgattccgtttctacgcagcacgctatgctcgccactcagctcaacgac
cgagtcaagaacggcttcgtcaagaaaggatccgttattcaattgatcgattacatttgc
agcgatgttcaaaagcgcaagattattgttgtgctgaacttggaaactataataccagac
tgtgaaataattggaaatccaaaattgtttattgatatgactgctcagaaggcattacct
aatggcaactcgatacagtcagcagggtttggttataacaatcctagtgcccaaaattat
ggcaataatatgcagagtttccagcctcctttgagtgcccaaaagcagggatctactgtg
catagtttcaggcccccactgacttctcaaaatcatggcaataatatgcaaagtttccaa
tccactttgagtgcccaaaatcacggtaataatgtacagagtttccaaccaactgttcaa
cctccatatagaccacctccaagttatagaaatcatggtgctatcatgaagaatgaggcg
ccagcacgcataattcccattgctgctttgaatccttatcaggggcgatgggctatcaag
gctagggtaactgcaaaaggggatctccgtcgctacaacaatgcccgaggagatgggaag
gtcttctcctttgaccttcttgactctaatggaggtgaaatacgagtgacctgcttcaat
gctgttgttgaccgcttttatgatgttattgaggttggtagagtctatttgatttcaaag
ggtagcttaaaacctgcacagaagaatttcaaccacttgaataatgaatgggagatattt
ttggaggcaacttcaattgtggatctttgtcctgatgaagatggttctataccacaacag
cagttctccttcaaatccatcagtgaaattgagaatgctgaaaacaatgccatacttgat
gttattggtattgtgatatcagtttgtccatcagttcctatcttgagaaagaatggtatg
gaaacacaaagaagaattctgaatctgaaggatagttctggcaggagtgttgagctaacc
ctttggggggatttctgcaataaggaaggtcaaaagctgcaagagattgttgattctggg
gcttttccagttttagctgtcaaagcaggcaaggttagtgacttcagtgggaaatcctta
gggacaatttcttctactcagctctttataaatccagatattccggaggctcatggcctg
aaagactggtttgatggaggggggcacattgctgcttctttgtccatttccagggacatt
atgccaggaggatctaagaatgagatacgtaaaacagtttctcagatcaagtttgaaggt
cttggaagatcagataggccagactgggtcacagtgagtgcaagaataacttttgtcaaa
acagatacattctgttatacagcttgcccattgatgattggtgataggcagtgtaacaag
aaagtgataagatcaggaaactcaagatggcaatgcgacagatgcaatcaagaatttgat
gagtgtgattataggtatcttcttcaagttcagattcaggaccatacaggattgacttgg
gtaacagcttttcaggaggctggggaagaaatattaggttaccctgcaaaggaattgtac
ttgatgaaatatgaattgcaggatgataccagatttgcagatataattcggggcagacta
ttccaccagtatctattcagacttaagatcaaagaggaaatgtatggtgacgaacaaagg
gtgaagatgactgttgttaaggcagataaggtgaactattcttcagagagtagatatctg
ctcgattttatttcaaaatatcctagatactga
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