Hevea brasiliensis (rubber tree): 110637427
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Entry
110637427 CDS
T05150
Name
(RefSeq) protein PIR isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110637427
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110637427
Factors involved in mRNA localization
Other mRNA localization factors
110637427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
110637427
NCBI-ProteinID:
XP_021643208
LinkDB
All DBs
Position
Unknown
AA seq
1284 aa
AA seq
DB search
MAVPIEEAIAALSTFSLEDEQPEVQGPAALVSSERGATGSPVEYSDVSAYRLSLSEDTKA
LNQLNLLIQEGKGMASVLYTYRSCVKALPQLPDSMKHSQADLYMETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERRINGPTITHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSVQWQDIDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FAVESLELDFALLFPERHILLRVLPVLVVLATSSEKDGESLYKRVKINRLINIFKNDPVI
PAFPDLHLSPAAILKELAMYFQKFSSQTRLLTLPAPHEFPPREAQDYQRQYLIVNHIGAI
RAEHDDFAIRFASSLNQLLLLKSTDGADIEWCKEVKGNMYDMVVEGFQLLSRWTGRIWEQ
CAWKFSRPCKDAIPSESNGTSATISDYEKVVRYNYSAEERKALVELITYVKNVGSLMHRC
DTLVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTSKTE
SELQSHGGEDSKGNFFSPRPVAPTAAQVHCLQFLIYEVVSGGNLRKPGGLFGNSGSEIPV
NDLKQLETFFYKLSFFLHILDYSATIATLTDLGFLWFREFYLESSRVIQFPIKCSLPWML
VDHVLESQNAGLIESVLMPFDIYNDSAQQALVMLRQRFLYDEIEAEVDHCFDLFVSKLSD
TIFTYYKSWAASALLDPSFLFALDNGEKYSVQPMRFTALFKMTRVKLLGRTIDLRSLIAE
RMNKVFRDNLEFLFDRFESQDLCAVMELDKLLDILKHTHELLSKDISIDSFGLMLNEMQE
NISLVSFSSRLASQIWSEMQNDFLPNFVLCNTTQRFVRSSRVPLVPVQKPSVPHAKPNFY
CGTQELNSAHQSFARLHSGFFGIPHMFSVVRLLGSRSLPWLIRALLDHISNKLTTLEPMI
TGLQEALPKSIGLLPFDGGVAGCMRLTKENLNWGTKSELKAEVLRGIKEIGSVLYWMGLL
DSVLREVDTTHFMQTAPWLGLLPGVDGQILHSQDGRDSPLVNLFKSSIAAIVSNPGCPNP
SSFFTMSKQAEAADLLYKANMNTGSVLEYALAFTSAALDKYCTKWSAAPKTGFIDITTSK
DFYRIYSGLQIGYLEQSDKQSFNYHEVLGDSVAWGGCTIIYLLGQQLHFELFDFSYQILN
VAEVETGSLSKMHRNPHLTQGWETLLEAMKKARRLNNHVFSMLKARCPLEDKIACAIKQS
GAPLHRIKFENTVSAFETLPQKGD
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggcagttccaatagaagaagccattgcagctctctctacattctctcttgaggatgag
caaccagaggtgcaaggaccagcggctctggtgtcaagtgagagaggagcaaccggtagt
ccagttgagtacagtgatgtttctgcatatcgcttatctctatctgaggacacaaaagct
ctcaatcagctgaatttgctcattcaagaagggaaggggatggcatcagtgctttataca
tatcgcagttgtgtcaaagcacttcctcagcttcctgactctatgaagcacagtcaggct
gacttatatatggaaacatatcaagttttggacttggagatgagtcgtctgcgtgaaatt
cagcgatggcaagcatcagctgcatccaaactagcagctgacatgcagcgcttttctagg
cccgaacgtcgtattaatggtcctacaataactcatctatggtccatgttgaagttactt
gatgttttagtgcaacttgatcatcttaaaaatgctaaagcaagcatacctaatgacttc
tcttggtataagaggacattcacacaagtcagtgttcagtggcaagacattgattcaatg
agggaggagttagatgatctacagattttcttaagcacaaggtgggctatcttgttaaac
ttgcatgtagagatgtttcgtgtgaacaatgtagaagacattcttcaggttctcatagta
tttgctgttgagtcactggagttggattttgcacttctattcccagagagacacattctt
ctgcgtgttttacctgttcttgttgtcctagcaacatcatcagagaaagatggcgagtcg
ctgtacaagagggtgaaaatcaataggctaattaatatttttaagaatgatccagtaatt
cctgcattcccagatcttcatctttctcctgctgcaattttgaaagaattggcaatgtac
tttcagaagttttcttcacagactcgtcttctcacccttccagcacctcatgaatttcca
ccccgagaggcacaagactatcagagacagtatctgattgtcaatcacataggagctatt
cgtgcagagcatgatgattttgcaattcgttttgcttcatcgttgaatcagctgttgttg
ttgaaatcaacagatggtgcagatattgagtggtgcaaagaagtcaagggaaacatgtat
gatatggttgttgaaggtttccagctcttaagcagatggacagggcgcatctgggaacag
tgtgcatggaaattctctcgcccatgcaaagatgcgattccttctgaatcaaatggaact
tctgcaacaatttctgactatgaaaaggtggtaagatataattatagtgctgaggaaagg
aaggcacttgttgaactcattacctacgtaaagaatgttggatccttgatgcatagatgt
gacacattggtagctgatgccttgtgggaaacaatacatgctgaggttcaagattttgtc
caaaacactttggcgacaatgttgcgaactaccttcagaaagaagaaggatctttcaagg
attctttctgatatgcggactctttcagcagactggatggcaaatacaagcaagactgaa
tctgagttacaatcacatggaggtgaagatagtaaagggaacttcttttctccgaggcca
gtcgcgccaacagctgcacaggtccattgcttgcaattcctgatatatgaagtggtatct
ggtggtaatcttcggaagcctggagggctttttggcaatagtgggtctgagattcctgta
aatgatttaaagcagttggagaccttcttttacaagcttagtttcttcctgcatatattg
gactattcagcaactattgcaactttgacggatcttggtttcttatggtttagggaattt
tatttggagtcttctcgtgttattcagtttcccatcaaatgctctcttccctggatgttg
gtggatcatgtgcttgagtcccagaatgcaggccttattgaaagtgttctgatgccattt
gacatctacaacgattcagctcagcaagctctggtgatgctaaggcagcggttcctctac
gatgaaattgaggctgaggtggaccactgttttgatctatttgtttcaaaactctctgat
actattttcacatattacaagagctgggcagcgagtgcattacttgatccatcattcctt
tttgccttggacaacggagaaaaatattctgtccaacctatgaggttcactgctctattt
aagatgactagagtaaagttgctggggaggaccattgatttaagaagcttgattgctgag
cggatgaacaaagttttcagagacaatcttgagtttctatttgatcgtttcgagtcacag
gatctatgtgcagtaatggaattagacaaattactggatatcctaaagcatacccatgaa
ctgctttctaaagatatttcaatagactcatttggtctcatgttgaatgagatgcaagaa
aacatctcacttgtgtcattttctagtcgacttgcttctcagatttggtcagagatgcaa
aatgatttcctgccaaactttgttctttgcaatactactcaacgttttgtccgatcatca
agagttccacttgttcctgttcaaaaaccatcagttccccatgccaagcctaacttctat
tgtggtactcaggagttgaattctgcacatcagagttttgctcgcttgcatagtgggttc
tttggaattccccacatgttttctgttgttagacttttgggatccagatcattgccttgg
cttatccgagccctcctagatcatatatcaaataagctaactacacttgaacccatgatt
acgggattacaagaagcattgccaaaatctattggattgcttcctttcgatggtggtgtt
gcaggttgtatgaggcttactaaagaaaatcttaattgggggacaaaatcagagctcaaa
gcagaggttcttagagggataaaggagattggaagtgtattatattggatggggcttctt
gacagtgtattgagggaagttgataccacgcatttcatgcaaacagccccttggttgggc
ttgcttcctggtgtggatgggcagatacttcattctcaagatggcagggatagtcctctt
gtcaatcttttcaaatcatctattgctgcaattgtatctaatcctggttgtccaaatccc
tcatctttcttcaccatgtcaaagcaggcagaagctgcagatcttttgtacaaggctaac
atgaatactggaagtgtgctggaatatgctcttgcttttaccagtgcagcacttgataaa
tattgtactaagtggagtgctgctcccaagacagggttcattgacataacaacttcaaaa
gatttctaccgtatatatagtggccttcaaataggatacctggagcagtctgataaacaa
tcattcaactatcatgaagtgctgggtgattcggttgcatggggtggttgcactataata
tacttgcttggtcagcagctacattttgagctcttcgacttttcatatcaaatcctcaat
gttgctgaggtggagactggatcactctcaaaaatgcacaggaatcctcatcttactcag
ggatgggaaactttattggaagccatgaagaaagcaaggaggttgaacaatcatgttttc
tccatgctaaaagcgcgctgccccttggaagacaagatagcttgtgctatcaagcaaagt
ggcgcccctctgcatcggattaagttcgagaacactgtttctgcatttgaaaccctgcca
caaaagggtgattga
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