Hevea brasiliensis (rubber tree): 110638472
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Entry
110638472 CDS
T05150
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03013
Nucleocytoplasmic transport
hbr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110638472
03015 mRNA surveillance pathway
110638472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110638472
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110638472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_10
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
110638472
NCBI-ProteinID:
XP_021644728
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MAKPTRGGPLRPSGSGSSSRSRSRSRSYSGSDSRSSSRSRSLSSGSRSRSRSRSFTSSSS
PSRSLSSGSRSPPAQKKSPAEVLRRGRSPPPQSRKTSPPPRKTSPIRESRVLHIDTLSRN
VHEGHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRADAEKALLYMDGAQIDGNV
VRARFTLPPRQKVSPPPKPIAAAPKRDAPKTDSASVDVEKDGPKRQRESSSHRKPLTSPR
RRSPLARRGGSPRRLPDSPPRRRADSPLRRRIGSPYRHGDTPPRRRPASPARGRSPSPPR
RYRSPARGSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPLRRRSRSPIRRPARSRS
RSLSPRRGRAPAARRGRSSSYSGSPSPRRVTRRISRSRSPRRPLKGRSTSNSSSSSSPPR
KP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggccaagccaacgcgaggcggtccgttgcggccttcagggtcgggctcgtcctcccgg
tcccgctccaggtcacgctcttactccggttcagattctcggtccagctcccgctcccgg
tctttatcctctggttctcgttctcgatctcgctctagatcgttcacttcatcctcctct
ccttctcgcagccttagctctggtagccgcagtcctcctgctcagaaaaagagtcctgct
gaagtgcttagacgaggtcgttctccaccaccgcaatctagaaaaacttctcctcctcca
aggaagacctctcccattcgtgagtctcgtgttctccatattgacaccctcagtaggaat
gtgcatgagggccatttaaaagaaatatttagtaactttggtgaagttgtacatgtggag
ttagcaatggaccgtaccgttaatcttccaaaaggatatggatatgttgaatttaagaca
agggctgatgctgagaaggccctactatacatggatggggcccagattgatggcaatgtt
gttcgagcaaggttcacattaccgccacgacagaaagtttcaccacccccaaaacctatt
gctgctgctccgaagcgagatgctcccaaaactgatagtgccagtgtagatgttgagaag
gatggaccgaaaaggcaaagagaatcttcttctcatcggaaacctctaacctcacctcga
agaagatccccccttgctcgaagaggtggatccccaagacgtcttccagattctcctcca
cgtcgacgcgcagattctcctcttcgtcggcgaatagggtctccttatcgtcatggggat
acaccaccaagaaggagaccagcatccccagctagaggtcgttctccatctccaccaagg
cgttatagatcccctgcaaggggttctcctagaaggattcgtggtagtcctgtccgcaga
cgttctcctcctcctccaaggagacgcacacctcctaggcgagcccgtagtcccccaaga
aggtccccacttcgtcgacgtagccgctctccaattcgtaggcctgctcgctcgcgttca
agatcactttcgccaaggagaggccgagctcctgctgcaagacgtgggaggtcatcatcc
tactctgggtcacctagtccacgcagggtcacccgcaggatatcaaggagccgcagtcct
agaaggcctttgaagggaagaagcaccagcaacagcagcagcagcagctcaccacctcgg
aagccgtag
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