Hevea brasiliensis (rubber tree): 110638615
Help
Entry
110638615 CDS
T05150
Name
(RefSeq) protein CHROMATIN REMODELING 5-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbr03021
]
110638615
03036 Chromosome and associated proteins [BR:
hbr03036
]
110638615
Transcription machinery [BR:
hbr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
110638615
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
110638615
SLIK complex
110638615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
110638615
NCBI-ProteinID:
XP_021644920
LinkDB
All DBs
Position
Unknown
AA seq
1768 aa
AA seq
DB search
MAFFRSYSNQTVSHSVLEEKGQEQRIGRMGGNDDIDVISSEREFDINMDAQYESEGENAG
RMQGDAAPDNGVGVSNSHVLQSSGRRNAAGKWGSTFWKDCQPLGAQVASDSGHDSKSDYK
NVEGSEDNISDGRDDRLESEDEDGQKEVGKGPKGHSDVPADEMLSDEYYEQDGEDQSDSM
HYRGFTHSTELFSRAHSKPVPVNNKISRSSRALCDNEDGDDDDNNDDGDADYEEEDEEDE
DDPDDADFDPDYGVASSHVGNKDKDWDGEDSDEDDYIDDDIDVSDEDDSYYVKKSKGRQQ
GKGICNIKYTRESKSLHASSRQKRGKTSFEEDEYTAEDSDSDSDGDIKKMTRRVHNHKSN
ARSAMSMAISGRNNEVRTSSRSVRKVSYVESEESEEIDEGKKKKPQKEEIEEEDGDSIER
VLWHQPKGMSEDALRNNQSTEPVLLSHLFDSELDWNEMEFLIKWKGQSHLHCQWKSFAEL
QNLSGFKKVLNYTKKVNEDVKYRRRLTREEIEVNDVSKEMDLDLIKQNSQVERIISDRIS
KDSSGSIVPEYLVKWQGLSYAEATWEKDIDIEFAQDAIDEYKAREAAMAVQGKMVDLQRK
KGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSML
GFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPDMNVIVYVGTRASREVCQQYEFYNDK
KVGRPIKFNALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLLEFSTKNK
LLITGTPLQNSVEELWALLHFLDCDKFKSKDDFVQNYRNLSSFNEIELANLHMELRPHIL
RRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVEL
KKCCNHPFLFESADHGYGGDSGINDSSKLERIILSSGKLVILDKLLVRLHATKHRVLIFS
QMVRMLDILAEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGI
NLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMV
LDHLVIQKLNAEGRLEKKEAKKGSYFDKNELSAILRFGAEELFKEDRNEEESKKRLLSMD
IDEILERAEKVEEKEAGGEEGHELLSAFKVANFCSAEDDGSFWSRWIKPEAISQAEQALA
PRAARINKSYAEANQSERSNKRKKKNSELLEPQERVHKRRKADYSAPSVPMIDGASAQVR
EWSQGNLSKRDALRFSRAVMKFGNANQIDLIVAEVGGSVAAASPDAQIELFDALIDGCKE
AVDGGNLDPKGPLLDFFGVPVKANDLLNRVQQLQLLAKRISRYENPIAQFRVLMYLKPSN
WSKGCGWNQIDDSRLLLGIHYHGFGNWEKIRLDERLGLSKKIAPVELQHHETFLPRAPNL
RDRANALLEMELAAVGGKNANAKVGRKASKKQKENVLNISVSHSRLKKGKPSSSMVGVHV
HASKNRPQKPQRAEQLVKEEGEMSDNEELCEQFKEVKWMEWCEEVMVDEIKTLRRLQRLQ
TTSADLPKEKVLLKIRNYLQLIGRRIDQIVLEYEEEFYRQDRMTTRLWNYVSTFSNLSGE
RLHQIYSKLKQEQEEEAGVGPIHMNGSASGPVDRDGDANYFPLTRHVERQRGYKNVNSYQ
MSESIEKGHDNGKFEAWKRRRRAEADTHPPLQPPFQRPMSNGNRLRDPNSLGILGAAPSD
SRLFNNERPFRMRQTGFPARQKFSSGIK
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atggctttttttaggagctattcaaatcaaacagtttcacatagtgtactggaagaaaaa
ggccaggaacagcgaattggtagaatgggggggaatgatgatatagatgttatttcaagt
gaacgggaatttgatatcaacatggatgcacaatatgagagtgaaggggaaaatgctggt
aggatgcagggtgatgcagctcctgacaatggagttggggtgagtaattcacatgttctt
cagtcttcagggaggagaaatgcagctggaaagtggggttcaactttttggaaggactgc
caacctctgggtgctcaagtagcttctgattctgggcatgattcaaaatcagactataaa
aatgtagaagggtcagaggataatatatcagatggaagggatgatagattagagtcagaa
gatgaagatggacaaaaagaagttggtaaggggccaaagggccactcagatgtccctgca
gatgaaatgttgtctgatgaatactatgagcaggatggggaagatcaaagtgattctatg
cattatagagggtttacccactcaactgagttgttttctagggctcattcaaaacctgta
cctgttaataacaaaatctctaggagttcaagagctttatgcgacaatgaagatggcgat
gacgacgacaataatgatgatggtgatgctgattatgaagaggaggatgaggaagatgaa
gatgatcctgatgatgcagactttgaccctgattatggtgttgctagtagtcatgtaggg
aacaaggataaagactgggatggtgaggattcagatgaagatgactatattgatgatgat
attgatgtctcagatgaagatgattcatactacgtgaaaaagtccaagggtaggcaacaa
ggtaaaggcatatgtaatataaaatatactagagaaagcaagtcattacatgcttcaagt
cgacaaaagagaggaaaaacatcatttgaagaggatgagtatacagcagaggactctgac
agtgacagtgatggagacattaagaaaatgacaaggagagtgcataaccacaaatctaat
gctagatcggctatgtcgatggctatcagtggccgaaataatgaggttcgaacatctagt
aggtcagttcgaaaggtatcatatgttgaaagtgaagaaagtgaagaaattgatgaaggg
aaaaagaaaaagccccagaaggaagaaattgaagaggaagatggtgactccattgaaaga
gtgttgtggcatcagcctaagggcatgtctgaagatgctctaaggaacaatcaatcaaca
gagcccgttctgttaagccacttgtttgattctgaactagattggaatgaaatggagttt
ctaatcaaatggaaaggccagtcacatttgcactgtcagtggaaatcttttgcagaatta
caaaatctgagtggttttaagaaggtactgaactacacaaaaaaagtgaatgaagatgtg
aagtatcggagaaggcttacacgtgaggagattgaggtcaatgatgtgagtaaagaaatg
gatttggatctaatcaagcaaaatagtcaggtggagagaattatttctgatcgaatcagt
aaagatagctctgggagtattgtgccagaatacttagtcaagtggcaaggactatcttat
gctgaagcaacctgggaaaaggatatagatatagaatttgcacaagatgcaattgatgaa
tacaaggcacgtgaggctgcaatggccgtacaagggaaaatggtggatctacagcgcaag
aaaggcaaagcaagtttaaggaagcttgatgaacagccagaatggttgagaggaggaaag
cttcgtgattatcagctagagggtttgaattttcttgttaatagctggagaaatgataca
aatgtcattttagctgatgagatgggtcttggaaaaacagttcagtcagtttccatgctt
ggttttttacagaatgcacagcaaatccctgggccatttcttgttgttgtaccattatcc
actttgtccaactgggctaaggaatttaggaagtggcttcctgatatgaatgttattgta
tatgttggtacacgtgccagcagagaggtttgtcagcaatatgaattctataatgataag
aaagttgggcgtcctataaaatttaatgcactgttgactacgtatgaagttgttctaaag
gacaaggcagtgctatccaagatcaggtggaattatctcatggttgatgaagctcatagg
ttaaaaaatagtgaggcacagttgtacactaccctattggaatttagcaccaagaacaaa
ttgttaattactggaactccattacagaacagtgtggaagagctatgggctctgcttcac
ttccttgattgtgataagttcaagagcaaggatgattttgttcaaaattaccggaacctg
agctcattcaatgaaattgagcttgccaatctacatatggaattgaggcctcacattctc
agaagagttatcaaggatgtagagaaatccttgccaccaaagattgagcgtattctgagg
gttgagatgtccccactccagaaacagtactataaatggattttggaacgcaattttcat
gacctgaacaaaggagttcgtgggaatcaggtttcacttttaaatatcgtagtggaattg
aaaaaatgctgcaatcatcctttcctatttgaaagtgcagatcatggttatggtggggat
tctggcattaatgatagcagcaagttggaaagaattatcttgagcagtggaaagctggtt
atacttgacaagttacttgtcaggttgcatgccacaaaacatcgtgttctgattttttcc
cagatggttcgaatgttggatatattggcagaatatatgtcacttaggggtttccaattt
caaaggcttgatggtagtacaaaggctgagttgcgtcagcaggctatggatcacttcaat
gcacctggcagtgatgatttctgcttccttctttcaactcgagctggtggcctaggcatc
aatcttgctacagcggacacagttataatatttgattcggactggaatccccaaaatgac
ttacaggcaatgagtagagcgcataggattgggcaacaagaagtagttaacatatataga
tttgtcactagcaaaagtgttgaggaggatatcctggagcgagctaagaaaaagatggtt
cttgaccatttggtgatccaaaaattaaatgcagagggtagattggaaaagaaagaagca
aaaaagggaagttattttgacaaaaatgagctgtctgcaattttaaggtttggtgcagag
gaactttttaaagaggatagaaatgaagaagaaagcaagaagagactattaagtatggat
attgatgaaattcttgaaagagcagagaaggttgaagagaaggaagctggaggagaggaa
gggcatgaattgttgagtgcttttaaggttgccaatttctgtagtgctgaagatgatggg
agtttttggagtcgttggataaaacctgaagcaatatcccaagctgaacaagcattggcc
cctcgtgctgcaaggatcaacaagagttatgctgaggccaaccaatctgagagaagtaac
aaaaggaaaaagaaaaattctgagcttctggaaccacaagagcgagtgcataaacgtcgc
aaagcagattattctgccccttcagtccctatgattgatggagcatccgcccaagtgagg
gaatggtctcaagggaatctgtctaagagagatgcattacgtttttctcgtgcggttatg
aaatttgggaatgcaaaccaaatagacttaatagttgcagaggttggtggatcagtggca
gcagcttctcctgatgcacagattgagctttttgatgctctgatagatggttgcaaggag
gcagttgatggaggaaatctagacccaaagggtcctttgttggacttttttggtgtgcct
gtgaaggctaacgatctgctgaaccgtgttcaacaacttcagctactagcaaagcgaatt
agtcgatatgagaaccccattgcacaatttcgagttctaatgtatctcaaaccttcaaac
tggtctaagggttgtggctggaaccagattgatgattcaagattgcttttgggaatacac
tatcatggatttggcaattgggaaaagataaggttagatgaaaggcttggcctttcaaag
aagattgctccagtggaactgcaacaccatgagaccttcctgccacgtgctccaaatttg
agggaccgtgctaatgcacttctggaaatggaacttgctgctgttggtggaaagaatgcc
aatgctaaggtgggtcgtaaggcctccaagaagcagaaggaaaacgttctcaacatctct
gtatctcacagcaggctcaagaaaggaaaacctagttcttcaatggtcggtgtccatgtc
catgctagcaagaatagacctcaaaaacctcagagagctgagcagttggtgaaagaggag
ggtgaaatgtcagacaatgaggaattatgtgagcagtttaaggaagtgaaatggatggaa
tggtgtgaagaagtcatggttgatgagattaaaacccttagacgcctccaaaggcttcag
actaccagtgcagaccttccaaaggaaaaggtgcttttgaagattcggaattacctacag
cttattgggcggaggatagatcaaattgttttagaatatgaggaagagttttatcggcaa
gacaggatgactacgcgattatggaattatgtctctactttttcaaatttatcaggggag
agacttcatcagatctattctaaacttaagcaggagcaggaagaggaagcaggtgttgga
cccatccatatgaatggttctgcatctggtccagtggacagagatggtgatgccaattat
tttcctctgacacgccatgttgagaggcaaagagggtacaaaaatgtgaattcctatcaa
atgtcagaatcaattgagaagggtcatgataatgggaaatttgaagcttggaaacggcgg
agaagagctgaagctgatactcatcccccacttcaaccaccctttcaaagaccaatgagt
aatggtaaccgtttaagagatcctaattcgttggggattcttggggcggcaccatctgat
agtaggctatttaataacgagagacctttccggatgcgtcaaactggttttcctgcaaga
caaaaattctcatcagggataaagtag
DBGET
integrated database retrieval system