Hevea brasiliensis (rubber tree): 110638639
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Entry
110638639 CDS
T05150
Name
(RefSeq) general transcription factor IIH subunit 2-like isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03022
Basal transcription factors
hbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110638639
09124 Replication and repair
03420 Nucleotide excision repair
110638639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbr03021
]
110638639
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110638639
Transcription machinery [BR:
hbr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110638639
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110638639
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Zn_ribbon_GTF2H2
Tfb4
IBR
vWA_LIC10012
Motif
Other DBs
NCBI-GeneID:
110638639
NCBI-ProteinID:
XP_021644939
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MKNICSKIVKNLCSTKKQEADRRISGETKQQQKQKFGSFHQFQGLAEKRQSNGEAEEDDD
DDDGDGHGLDAWERTYTDERSWEALQEDESGLLRPIDNKIIHHAQYRRRLRSLSTTAARI
QKGLIRFLYIVVDLSRAASEMDFRPSRMVVIVKHVEAFVREFFDRNPLSQIGLVTIKDGV
AHSLTELGGSPESHIKALMGKMECSGDSSLQNALNLVQGYLDQIPSYGHREVLILCSALS
TCDPGDIMETIKQCKKSKIRCSVIGLSAEMFICKHLCQETGGIYSVAMDEVHFKELMLEH
APPPPAIAEFAIANLIKMGFPQRVAEGSISICSCHKEAKVGDGYICPRCKARVCELPTEC
RVCGLTLVSSPHLARSYHHLFPIVPFDEVSPRQNVLHHRPPKTCFGCQQSLLNPGNKPSL
CVACPKCKQYFCIDCDIYIHESLHNCPGCDSIRHS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatttgttcaaaaattgttaaaaacctatgcagcacaaagaagcaagaagcc
gatagaagaatcagtggagaaacgaagcaacagcagaagcagaagtttggttcttttcat
caattccaaggcttagctgaaaagaggcaatctaatggagaagctgaagaagatgacgat
gatgatgatggagatggtcatggacttgatgcgtgggagaggacttacactgatgagaga
tcatgggaagctcttcaagaggatgaatcaggactgcttcgtcctatagacaataagatc
atacaccatgctcagtatcgccgccgccttcgttccctttctaccactgctgctcgcatt
cagaagggcctcattcgctttctttacattgttgtcgatctctccagggcagcatcagag
atggattttcgaccaagtcgaatggttgtgattgtaaaacatgttgaggcttttgttagg
gaattttttgatcggaatccacttagccagattggtttggtgactataaaagatggggtt
gcccattccttaacagagcttggtgggagtccagagtcccacattaaggctttgatgggg
aagatggaatgctcaggcgattcatcactacagaatgccctcaatcttgtccagggatat
cttgatcaaattccatcatatggtcatcgtgaagttctgatcttatgttcagctctcagc
acctgtgatccaggagatataatggagaccataaagcaatgcaagaaatctaaaattagg
tgctcggttattggtctttctgcagaaatgtttatatgcaagcatctctgtcaagaaact
ggtggaatatactccgttgcaatggatgaggtccactttaaagagttaatgttagagcat
gcaccgccacccccagcaatagcagaatttgcaattgctaatttaatcaagatgggtttc
ccacaaagggtggcagagggctctatctcaatttgttcttgtcataaagaagctaaagtt
ggtgatggatacatttgtccgagatgcaaggcgcgtgtatgtgagcttcctactgaatgc
cgtgtctgtggattgacacttgtttcttcaccccatttggcaaggtcatatcatcatctc
tttcccattgtgccatttgatgaggtgtctccaaggcaaaatgtactacatcacagacca
ccgaaaacttgttttggctgccaacagagcctcctcaaccctggcaacaagcccagcctt
tgtgttgcttgtccaaaatgcaaacaatacttctgcattgattgtgacatttatatacat
gagagcttgcataactgcccaggctgtgacagcattagacattcatag
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