KEGG   Hevea brasiliensis (rubber tree): 110638646
Entry
110638646         CDS       T05150                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
hbr  Hevea brasiliensis (rubber tree)
Pathway
hbr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110638646
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hbr03021]
    110638646
Enzymes [BR:hbr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     110638646
Transcription machinery [BR:hbr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     110638646
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF2002
Other DBs
NCBI-GeneID: 110638646
NCBI-ProteinID: XP_021644948
LinkDB
Position
Unknown
AA seq 1204 aa
MGESVDAMEEDIGTSSKGEKLPNGLDMEIDFDDDDDGDDDIDFMDLTTSLRDLGEGFLKD
FCKKAATLFFNEYGLISHQINSYNDFIHNGLQKAFDSFGELIVEPGYDPSKKGENEWRYA
SVRFGKVSLDKPSFWAGSDGIEHNMLPRHARLQNMTYSSRMKVNVSVEVYTQKVVRSDKF
KTGKDQFVDKVVLSTDNRDIIIGRMPVMVKSDLCWMKTVEKGDCDFDHGGYFLIKGAEKV
FIAQEQICLKRLWISNAQGWTVAYKSEIKRNRLIVRLVGLSKDDSIKGEKKGLIVYFMST
EIPLWILFFALGIRSDKEVVDLIDYNTENASIMNIFFASIHDADEKCEWFRRERTALNYV
IKQIQGTRFPPEETEDFVSLYLFPSLHSPRQKARFLGYMVKCLLQAYSGQRKCDNRDSFR
NKRFELAAELLERELKVHIAHARRRMAKALQKDLYGDRDVRPIEHYLDASIITNGLSRAF
STGAWSHPFKRMERISGVVANLGRANPLQTMVDLRKTRQQVQYTGKVGDARYPHPSHWGR
VCFLSTPDGENCGLVKNLAATGLVSTNISEPLVDKLFDCGMEKLVDDTHTKLDRKFRVFL
NGEWVGVCEDSHLFVSELRRLRQRKRLPQQVEIKRDEQQREVRIYSDAGRILRPLLVVKN
LTKIKAFKGGNYTFHSLLDKGIVEFVGTEEEEDCSTAWGVKFLLAGADGKKSLKYTHCEL
DMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLHYPQRP
LFRTVTSDCLGKAGYQRGHNGMLPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRSSLERG
MFRSEHIRSYKADVDNKELLDKRRKFDDPVNFGKIQSKFGRVDSLDDDGFPFIGANLQSG
DIVIGRCSESGVDHSMKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDKFSSM
HGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSLRY
ATPFSTLSVEAITDQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKV
KFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHIC
QKCKNVANVIQRGVPGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFE
TRLC
NT seq 3615 nt   +upstreamnt  +downstreamnt
atgggggagtcagtggatgccatggaagaagacataggcacgagtagtaagggtgagaag
ctcccaaatggacttgatatggagatagattttgacgacgatgatgatggtgatgatgat
attgactttatggacttaaccactagcttacgcgatttgggtgaaggttttctaaaagat
ttctgtaaaaaggctgcgaccttgttcttcaatgagtatggtcttattagtcaccagatt
aactcctacaatgacttcatccacaatggtcttcagaaggcctttgattcttttggtgag
ctgatcgttgagcctggatatgacccatcaaagaagggagagaatgaatggcgatatgct
tcagttaggttcgggaaggtcagccttgataaaccaagcttttgggctggttcggatggt
attgaacacaatatgctccccaggcatgcgagacttcagaatatgacgtattcatccagg
atgaaagtgaatgtttctgtagaggtgtacactcagaaagttgttagaagtgataagttt
aaaactgggaaagatcaatttgttgacaaggtagttctaagcactgataacagagatatc
ataattggaaggatgcctgtaatggtgaagtctgacctttgctggatgaaaacagttgaa
aaaggtgattgtgattttgatcatggaggttattttttgatcaagggtgcagagaaggtt
tttattgcacaagaacaaatttgtttaaagagactttggatctcaaatgctcagggctgg
acagttgcatataagtctgaaattaaaaggaatagattaattgttagattagtggggctc
tctaaagatgacagcattaaaggagaaaagaaaggacttattgtatatttcatgtcaaca
gagatccctttatggatattgtttttcgcccttggaatcaggtcagacaaagaagttgta
gatctgattgattataatacagagaatgccagcattatgaatatatttttcgcttcaatt
catgatgctgatgagaaatgtgagtggtttcgtagggagagaactgctctgaattatgtt
attaagcaaatacaaggaaccagatttccaccggaggaaactgaagatttcgttagtttg
tatttgtttcccagtctccatagccctaggcaaaaggcccggtttctaggttatatggta
aagtgccttttacaggcatatagtggccaaagaaaatgtgataacagggatagttttaga
aacaagagatttgagttggctgctgagttgcttgagcgagagttaaaagtacacattgca
catgcacggaggcgcatggccaaggctttgcagaaagacctctatggagatcgtgatgtg
cgcccaattgaacattatttggatgcttctataatcacgaatggtctatcgagagcattc
tcaactggggcatggtcacatccattcaagaggatggaaaggatatctggtgtagtggca
aatctggggcgtgcaaatccattacaaacaatggtcgatttgcggaaaacacgacagcag
gttcagtacacagggaaggttggagatgctagatacccgcacccttctcactggggtagg
gtttgctttctttctactccggatggtgaaaactgtggacttgtaaagaatttggctgcc
actggacttgttagcacaaacatatcagaacctctagttgacaaattgtttgattgtgga
atggagaaacttgttgatgatacccatactaaactggacaggaagtttagagtatttctg
aatggggaatgggttggagtttgtgaagattctcatttatttgtttctgagcttagacgt
ttacggcagaggaagaggttgcctcaacaggtggaaatcaaaagagatgaacagcaaaga
gaagtgcgcatatattctgatgctggaaggattttacgtccccttttggttgttaagaat
ttaactaagataaaagcatttaaagggggaaattacaccttccattctcttctcgacaag
gggattgttgaatttgttggaacagaagaggaagaggattgcagcactgcctggggagtt
aaatttcttctagcgggagctgatggaaagaaatctctgaagtacacacactgtgaactt
gacatgtccttcttattgggtttaagttgtgggatcattccctttgccaatcatgaccat
gcaagaagagttctataccaggctcaaaaacattctcagcaggctataggtttttccaca
acaaatcccaacatcagagtggataccctgtctcatcaattgcactatccccagaggcca
ctttttaggactgtgacttctgattgtcttggaaaagctggataccaacgaggtcataat
ggaatgctgccaaaaccggagttatataatggtcagaatgctattgtggcagtcaatgtt
catctaggatacaatcaagaggactccttggtaatgaatcgctcttctttagagcgtggt
atgtttcgatctgaacatatcagaagttataaggctgatgttgataataaagaactatta
gacaagaggcgaaagtttgatgatcctgtgaattttgggaagatacagagtaagtttgga
cgtgttgacagtcttgatgatgatggttttcctttcattggagctaatctacaaagtggt
gatattgttattgggaggtgttctgaatctggggttgatcatagtatgaaattaaagcac
actgagaggggcatggtccagaaagttgtattgtcttctaatgatgaggggaagaatttt
gctgtggtgtctctgaggcaggttcgttctccatgtcttggagacaagttctctagcatg
catggacaaaaaggtgttctgggctttttggagtctcaagagaacttccccttcaccata
cagggaatagttcctgatattgttataaacccacatgcatttccttcacgacaaactcct
ggtcaactcttagaggctgctttgggaaagggaattgcctgtggtggatcattgagatat
gccacccctttctccacgctgtctgttgaagcaatcacagaccagcttcacagggctgga
ttttcaagatggggaaatgagagagtttacaacggtcgaactggtgaaatggttcgttct
ctcatttttatgggtccaactttctaccagcggttgatccacatggctgaagacaaagta
aaatttcgtaacactgggcctgtgcacccactcactagacagccagttgcagaccgaaag
cgttttggtggtatcaagtttggtgagatggagcgggactgccttatagctcatggtgca
tctgcgaacctgcatgagcgtctttttactctcagtgattcttcacagatgcatatttgc
cagaaatgcaaaaatgtggcaaatgtgattcaacggggagtgcctggtggccgcaagatt
aggggtccctactgccgagtttgtgagtctgttgatgatatagtcagggttaatgtacct
tatggggccaagttattgtgccaggagctcttcagcatgggcataaatttgaagtttgaa
actcggctatgttga

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