Hevea brasiliensis (rubber tree): 110639084
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Entry
110639084 CDS
T05150
Name
(RefSeq) endoribonuclease Dicer homolog 2-like isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hbr03036
]
110639084
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110639084
microRNA pathway
RISC loading complex
110639084
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
DEAD
PAZ
ResIII
Dicer_dimer
dsrm
SNF2-rel_dom
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-GeneID:
110639084
NCBI-ProteinID:
XP_021645583
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MEPVYMDTDDTQKLAAEPLPFARSYQLEALEKALKQNTVLLLETGSGKTLVAIMLLRSYA
HLLRKPSPFIAVFLVPQVVLVHQQAEAVESHTDLIVGKHRGEMGVDFRDAASWKQRLQKH
EVLVMTPQILLDGLRHSFIKLDLIKVLIFDECHHTSRKHPYACILTEFYHCQLSFGNCNL
PRIFGMTASPIKSKGAKSEPTYWPKIRELENMMHSKVYTCVSESVLAKFIPFSTPKFKFY
EHMGVPNAVHVSLAEKLKILEAKYECHLKQLDLIDLAVESTSKKISKMHSTLMYCLDEHG
VWPAFKAAEVLSRPKSNFLSRGKSEAFGENIVKEFNLEALQTFDNCIRTGPKWSIGVNSK
DDVDAGLLTTKIFCLVDSLLEYRYFKPAPRCVIDKEREICTLLLPKSCPIETICVQGNIK
TLKQKACLEACKPLHKIGALTDNLVPDCVEEEAVVKEVGNVPCGDEQPMYYPAELVSQGS
KESTRTYYRYLIELNQNFDSDIPVHNIILLMRSELESNILSLDFDFELDRGRLTVKLKYI
GEIDLTPEMVLICRKFLIALSKVLVDRNVNELEEILNGLQLSNDPEIDYLLLPSMGSCQK
PSIDWNSIISVLFSHENAWKYHVNSPLKDCTRIMWTKNGQVCKCMLQNSLVYTPHNGEVY
CIEGIYDHLDGRSLLKLKNGDYTSYKEYYKDKYDIELLFDQELLLRGRHIFPLHYYFRRC
RQHKGKDSQNAYVELPPELCCIKMSPISISTFYSFTFVPSIMHRIESLLIAVNLKKMHLD
HCTQNVVIPTIKVLEAITTKKCQEKFHLESLETLGDSFLKYAASQLLFKTYQKHHEGRLS
SKKDKLISNDTLCKLGCDCKLPGFIRNESFDPKNWMVPGDASGNYSLREDFLSNARSLYI
TRRRKLKKKKVADVVEALIGAYLSAGGEIAALLFLNWIGIKVDFFNTPYKPQFQVKPEEH
IEVRHLESLLNYTFRDPSLLLEALTHGSYMLREIPRCYQRLEFLGDAVLDYLITEYLYGK
YPGISPGLLTEMRSASVNNDCYARSAVREGLHKHILYTSQKLDKDIGFAVKCCENYSSES
TFGWESEISFPKVLGDVMESLAGAIFVDSGYNKDVVFRSIRPLLEPLVTLETLRLNPTKE
LNELCQIKHFKKKNPFVPLNNGMSSVTVEVKANGVKFKHTSTAANKKTAEKLASKEVLRV
LKEKFNI
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgtctacatggacacagatgatacccagaaacttgctgctgaacctctacca
tttgctaggagctatcaactagaggcactggagaaggcattaaagcagaacacagtactg
ctcttggagactggttctggcaagactctggttgctatcatgcttctacgcagttatgcc
catcttcttcgcaaaccttcacctttcattgcggtcttcttggttcctcaagttgttctg
gtccatcaacaagctgaagctgtggaatcgcacactgacttgattgtgggtaagcaccgg
ggagaaatgggagttgacttcagggatgctgcttcttggaagcaacgtttacaaaaacat
gaggtgcttgtgatgacaccacaaattttgcttgatggcttgaggcattcctttatcaaa
ctagacttgataaaggttttgatatttgatgaatgccatcacacgagccgtaaacaccct
tatgcttgtattttgacagaattctatcactgtcagttaagctttggcaattgtaatctt
ccaaggatatttggaatgacagcttctccgattaaatcaaagggtgcaaaatcagaacca
acgtattggccaaagattagagagcttgagaatatgatgcactcaaaggtgtatacctgt
gttagtgaatctgtgcttgccaagtttataccattttcaactccaaagtttaaattttat
gagcacatgggcgtcccaaatgctgtacatgtgagtttagctgaaaaattgaagattttg
gaagcaaagtatgagtgccacttgaagcaattggatctcattgatttggccgtggaatct
acaagcaagaaaatatcaaaaatgcattctacgttgatgtattgtttggatgaacatggt
gtttggccggcttttaaggctgcagaggtcttatcgcgccctaaaagcaactttctttca
cggggtaaatcggaggcatttggtgagaatattgttaaagagttcaatttggaagcctta
cagacatttgataattgcattagaactggtccaaaatggtctattggtgttaattctaag
gatgatgtggatgcagggcttttaactacaaaaatcttttgcctcgttgattcacttctt
gaatacaggtattttaaacctgcaccaaggtgtgttatagacaaggagagggagatttgc
acattacttctaccaaagagctgtcccatagagactatctgtgtacaaggaaacattaaa
actttgaagcagaaggcttgccttgaagcatgcaagccacttcacaagattggtgcgtta
actgataatcttgttcctgattgtgttgaggaagaagctgttgttaaagaagttgggaat
gttccttgtggtgatgaacaacctatgtactacccagctgagctagtcagccaaggttca
aaggagtcaacaagaacgtactaccgctacttaattgaattaaaccagaattttgattct
gacattcctgtacataatattatacttctcatgcggagtgagctggaatcaaatatctta
agtctggattttgactttgaacttgatagaggacgattaactgtgaaattaaagtatatt
ggagaaattgatcttactccagagatggtccttatatgtaggaagtttttgattgctctt
tccaaagttcttgtggatcgtaatgtaaatgaattagaggagattttaaatggattgcag
ctgagtaatgatcccgagattgattatttacttcttccatccatgggctcatgtcagaaa
ccttccattgactggaattccattatctctgtactgttctcacatgaaaatgcatggaag
tatcatgtgaattctcctctgaaggactgtacgcgtattatgtggacaaaaaatggtcag
gtatgcaaatgcatgctacagaattctttggtctacacaccacataatggagaagtctat
tgcattgaaggcatatatgatcatttggatggaaggtcacttttgaagttgaagaatggc
gattatacaagttataaggagtattacaaagataagtatgacatcgaactgctttttgat
caagaattacttcttagaggacggcatatttttcccttgcattattactttcgtagatgc
agacaacacaagggaaaagattcacaaaatgcatatgttgagttgccccctgaactttgt
tgcattaaaatgtcacctatatccataagtactttctattcttttacatttgttccatca
atcatgcatcgaattgagtctttgctcattgctgtcaacttgaagaagatgcatttggat
cactgcacgcaaaatgtcgttattccaaccatcaaggttttggaagcaattaccacaaaa
aagtgtcaagagaaatttcatttggaatcactagagactcttggggattcttttcttaaa
tatgctgctagtcagctgctattcaaaacataccaaaaacatcacgagggcaggctcagc
agtaagaaggacaaacttattagtaatgacacactttgcaaattaggatgtgactgcaaa
cttccgggattcatccgcaatgagtcttttgatccaaaaaactggatggttcctggtgat
gcttctggaaattattcattacgggaggattttctctccaatgcaaggagtctatacata
acaagaagaagaaaattaaagaaaaagaaagttgctgatgttgttgaggcacttattggt
gcttacctcagtgctggtggtgaaattgctgccttattatttctgaattggattggtata
aaggtagatttttttaatacaccgtataagccacaattccaagtgaaaccagaggagcac
attgaggtccgccacttagagtctctattgaactacacttttagggatccttctctgtta
ttggaagcacttactcatggttcttacatgcttcgtgagattccaagatgttatcagcgg
ctggaatttcttggagatgcagtgttagattaccttatcacagagtatttgtatggcaag
tatcctgggatatcgccaggactattaactgaaatgagatctgcttcagtgaacaatgac
tgctatgcaagatctgcagttagggaaggactgcataagcatattctctacacatctcaa
aagcttgacaaggatattggctttgcagtcaaatgttgtgagaattattcttcagaatca
acttttggatgggaatctgagatatcttttcccaaggttcttggagatgtgatggagtct
ctggcaggagctatttttgttgattctggatacaacaaagatgtggtctttaggagcata
aggccacttttggagcctttggttactttggagacacttagattaaatcctacgaaagag
cttaatgaattatgtcaaataaaacattttaaaaagaaaaacccctttgttcctctcaac
aatggcatgtcttctgtcactgttgaggttaaagctaatggggtaaaatttaagcacaca
tctacagctgcaaacaagaagacagctgaaaaattagcttctaaagaggttttgagggtc
ttgaaggaaaaatttaacatctag
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integrated database retrieval system
