Hevea brasiliensis (rubber tree): 110639877
Help
Entry
110639877 CDS
T05150
Name
(RefSeq) polyadenylate-binding protein 8-like
KO
K13126
polyadenylate-binding protein
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03015
mRNA surveillance pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110639877
09123 Folding, sorting and degradation
03018 RNA degradation
110639877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110639877
03041 Spliceosome [BR:
hbr03041
]
110639877
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110639877
mRNA cycle factors
Stress granule specific factors
110639877
Spliceosome [BR:
hbr03041
]
Complex C
Other components
Complex C specific factors
110639877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_occluded
RRM_3
RRM_7
RRM_RdRP1_2
RRM_MARF1
BRAP2
GH97_C
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
110639877
NCBI-ProteinID:
XP_021646683
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MAQVQVPVQAQGVNGGANQQFVPTSLYVGDLDANVTNSLLYDLFNQVGQVVSVRVCSDLT
TGRSLGYGYVNYSNPQDAARALDMLNFTLLNGSPIRIMYSHRDPSIRKSGSGNIFIKNLD
KAIDHKALHDTFSVFGNILSCKVATDSSGKSKGYGFVQFDNEEAAQMAIEKLNGMLLNDK
QVYVGPFLRKQERESAIDKTRFNNVFVKNLSEAITDDDLKKIFGEFGTITSAVVMRDGDG
KTKCFGFVNFENADDAARAVEALNGKKFDEKEWYVGKAQKKSERETELKLRFEQSMKEAA
DKFQGANLYIKNLDDSIGDDNLKELFSQFGTITSCKVMRDPNGISRGSGFVAFSTPDEAS
RALMEMNGKMVASKPLYVALAQRKEDRRARLQAQFSQMRPVAMPPSVAPRMPMYPPGGPG
LGQQIFYGQAPPAIIPPQPGFGYQQQLVPGMRPGGAPLPNFFVPMVHQGQQGQRPGGRRA
GAAQQSQQPVPLMQQQMLPRGRVYRYPPGRGLPDVPMTGVPGGMLSVPYDMGGMPLRDTA
LSQPIPIGALATALANATPEHQRTMLGENLYPLVEQLEPDAAAKVTGMLLEMDQTEVLHL
LESPEALKAKVAEAMEVLRSVQQQQAGGAADQLASLSLNDNLVS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggttcaagtcccggttcaggctcagggtgtcaacggcggagcaaaccagcag
ttcgtgccgacgtctctttacgtcggggatctggatgcgaacgtgaccaattcgcttctg
tacgatctgtttaatcaagtcgggcaagtggtttcagttcgggtttgcagtgacttgact
accggacgatcgcttggttatggctacgttaactatagcaatcctcaagatgctgcaagg
gcattggatatgctaaatttcactcttctcaatggaagccccattagaatcatgtattct
catcgtgacccaagtattcgcaaaagtgggtctgggaacatatttatcaagaatttagac
aaggcgattgaccacaaagcattgcatgatactttctcggtatttgggaacattctatct
tgcaaggtggctacagattcctctggcaagtcaaagggctatggctttgtacagtttgac
aatgaggaagctgcccaaatggctatagagaagttaaatggtatgttattgaatgataag
caggtgtatgttggaccttttcttcgcaaacaggaaagagagagtgcaattgacaagaca
agatttaacaatgtctttgtaaagaatctctcagaagcaataactgatgatgatttgaag
aaaatttttggtgaatttggaacaatcactagtgctgtggtgatgagggatggagatgga
aaaacaaagtgctttggatttgtcaacttcgagaatgcagatgatgctgctagagctgtt
gaggcccttaatggaaagaaatttgatgaaaaggagtggtatgttgggaaagcccagaag
aaatctgaaagggaaactgaattaaaacttcgttttgagcagagtatgaaggaggcggct
gataaatttcaaggggccaatttgtacattaaaaatctagatgatagcataggtgatgat
aatcttaaggagctcttctctcaatttggtacaatcacatcatgcaaggttatgcgagat
cctaatggaataagcagaggttcagggtttgttgcgttctctactccagatgaggcgtct
agagctctcatggagatgaatggcaaaatggttgcaagcaaacctttatacgttgcactt
gcacaaagaaaggaagatagaagagccaggttgcaggctcaattttctcaaatgaggcca
gttgcaatgccaccatcagttgctcctcgtatgccaatgtacccccctggtggtccagga
cttggacaacagatattctatggacaagccccacctgctatcatacctcctcagcctgga
tttggatatcagcagcagcttgtacctggtatgaggcctggtggggctcctttgccaaat
ttctttgtgccaatggttcatcaggggcagcagggacagcgtcctggtggtcgacgggct
ggagctgctcagcaatcccagcagccagtgccactcatgcagcagcagatgcttccaagg
gggcgtgtctatcgctaccctcctgggcgtggcttgcctgatgttccaatgaccggtgtt
cctggagggatgctttctgttccatatgacatgggtggtatgccattgcgtgatacagct
ttgtctcagccaattccaattggtgctttggctactgcacttgcaaatgctactccggaa
catcagaggacgatgctgggtgagaatctttaccctctggtagaacagctggagcctgat
gcagcagctaaggtgacaggcatgcttctagagatggaccagactgaagttttgcacttg
ctcgagtcaccagaagctctaaaagcaaaggttgctgaggcaatggaggttctgaggagt
gttcagcagcaacaggctggtggcgcagctgatcaactagcctctttgtcattgaatgac
aaccttgtttcctag
DBGET
integrated database retrieval system
