Hevea brasiliensis (rubber tree): 110640538
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Entry
110640538 CDS
T05150
Name
(RefSeq) cleavage stimulating factor 64
KO
K14407
cleavage stimulation factor subunit 2
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110640538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110640538
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110640538
U7-dependent histone pre-mRNA processing factors
110640538
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
partial_CstF
RRM_7
DUF8400
Motif
Other DBs
NCBI-GeneID:
110640538
NCBI-ProteinID:
XP_021647563
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MASSSQHRCVFVGNIPYDATEEQLMDICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEE
TALSARRNLQGYQINGRQLRVDFAENDKNADRNREQGRGGPGLAASVDPQKQVGGPAILG
ESAQHQPIGLHIAITAATVMAGALGGAQTGMLANQNGLQSQSALASDPLTLHLAKMSRSQ
LNDIMSELKVMATQNRELARQLLLARPQLPKALFQAQIMLGMVTPQVLQTPNIRQPPGQS
ALHSLQNTQQGKQSAIQTLTGLPPLAQRTHSGLVSKLQEGQFSAMPQNSLLQNQFSALPQ
SMQPRTLIPQHANSNVPQQATLPGQSGVPPLPPVHLSVRPQIQVASFSSLNQQVPPSLLQ
HSGQQVGTANFGHTSQLVLSNASIQSSVVSRPSPSNAAFQAGPPISSDISDAVGNGTDRS
IHAPDDIALVCRSNAYLNTQINVVNDSKEPINHPSKLLKLNDGRSMSISSGALCVPNSTV
SGPSQAFTVSSVPSNPLPNPEELQQSEKQVSQSQLHPDVESALLQQVLNLTPEQLNLLPP
EQRQEVIQLQQALRRDQTQPS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcttctcagcatcgctgcgtttttgttgggaatataccatatgatgctact
gaggaacagcttatggatatctgcagagaggttgggcctgtagtgtctttcaggttagtc
attgatagagaaaccggaaaaccaaagggttatggcttctgtgaatataaggatgaagaa
acagctctgagtgctcgtcgtaatcttcagggttatcagatcaatggcaggcaattacgg
gttgattttgctgaaaatgacaaaaatgctgaccgaaatcgagagcagggtcgtggggga
cctggactggctgcgagtgttgaccctcagaaacaagtagggggcccagcaatcctcggg
gaatctgcacagcatcagccaattggtctccatatagccataactgctgcaactgtcatg
gcaggagctttaggtggtgctcagacaggcatgctggccaatcaaaatggtttgcagagt
cagtcagcattagccagtgatcctttaactcttcatttggccaaaatgtcaaggagtcaa
ttgaatgatatcatgtcggagctgaaggtcatggcaacgcaaaacagggaactagctcgc
cagctactgcttgcgagaccacagttgccaaaagctctttttcaggcacagataatgctg
ggaatggtgaccccccaagtgttgcagacgccaaatattcggcagcctccaggtcaatct
gcacttcattccttacaaaacactcagcagggtaagcagtcagcaattcaaactcttact
gggttacccccccttgcacagagaacacactctggcttggtgtccaaactgcaagagggc
caattctctgctatgcctcaaaactctttgctacaaaaccaattttctgcactcccacaa
tccatgcagcctcgaactctgattccacaacatgccaatagcaatgttcctcaacaagcc
acattaccaggccagtctggagttccaccacttcctcctgtacacctctctgttagacca
caaattcaggtggcaagtttctcttctttaaaccaacaagtaccaccttcattgctacaa
cactctggacaacaggttggaactgcaaattttgggcatacctctcagttggttctttca
aatgcatcaatacaatcatctgttgtatctcgtccttccccatccaatgctgcattccag
gctggccccccaatatcatcagacatttcagatgcagttggaaatggtactgatagatct
atccatgctccagatgatatagctctggtctgcagaagtaatgcttatttgaacacacaa
ataaatgtggttaacgattctaaagaaccaattaatcacccttcaaagctgctaaaattg
aatgatggaaggagcatgtctatctcatcgggggctttgtgtgtgcccaattccactgta
tctggaccatcccaagcttttacagtcagttcagtgccttcaaatccacttcctaatcca
gaagagctgcaacaatctgaaaaacaagtttctcaatctcagcttcatccagatgtggag
tctgcattattgcagcaagtgctgaacctcacaccagagcagttgaatttattgccacca
gaacagcgacaagaagttattcagctccaacaagcacttaggagagatcagacacaacca
tcatag
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integrated database retrieval system
