Hevea brasiliensis (rubber tree): 110640927
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Entry
110640927 CDS
T05150
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbr03016
]
110640927
Enzymes [BR:
hbr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
110640927
Transfer RNA biogenesis [BR:
hbr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110640927
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_25
Methyltransf_31
T6PP_N
Methyltransf_11
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
110640927
NCBI-ProteinID:
XP_021648158
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MEDKRCKFWLPRKNRFCANAPLNDSPFCGNHKPRSDGQWIPCPIDPSHSVLQENIDGHVR
RCPLLKQAQSLSLQPYYQKGINAGKEEDDDITSEMKRSAVYSMTVSEFYKLIKKIESIHA
SICDNILESYKIPEACNMWIKREVDRKLPFQEKHVKQQASIIGNLEDFGVIKSSLIKEQC
DDDGLCVDKIDSRPAVVEFGAGRGYLTQMLADCYGIERVFLVERKSYKLKADRSLRQKES
LILERLRIDIEDLNLKAVDSLQGVPYLAIGKHLCGPATDLTLRCCLSEQDSEHNMEQCLG
NYSLKGLAIATCCHHLCQWKHYANKKFIVDLGITKEEFHAITWFTSWAVDADHGSDLSVD
GRLHLQSMEQEQYVGDANGIEDAVRNMKAVDRAVLGFMCKQIIDLGRMMWARERGLDTQL
VKYVPSSISPENHLLIAKHAKCS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaagcgctgcaagttctggctccccagaaagaaccgattctgtgccaatgct
cccctcaacgattcccccttctgtggaaaccacaagccgaggtccgatggccagtggatc
ccttgcccaatcgacccttcgcactctgttcttcaagaaaatatcgatggacatgttagg
agatgccctttattgaaacaagcccaatccttgtcccttcagccatattaccagaagggc
attaatgctggcaaagaagaagacgatgacattacatcggaaatgaagaggagtgccgtt
tatagcatgactgtgtctgaattttataagttaataaagaagattgagtcaattcatgct
tcgatatgtgataatattttggaatcgtataagatccccgaagcttgtaacatgtggatt
aagagagaagtagacaggaaattaccatttcaagagaaacatgtcaagcaacaagcttca
attattggaaacttggaggattttggggtgatcaagagttctcttataaaagaacaatgt
gatgatgacggtctatgtgttgacaaaattgattctcgccctgcagtggttgaatttgga
gcagggagaggatacttgacgcagatgctagcagattgttacgggattgaaagggtcttt
ttggttgaacgaaaatcatacaaactcaaggcagatagatcgttgcgacagaaagagagt
ttgatattagagcgattgagaattgatatagaggatttaaacttaaaagctgtcgactcc
ctgcagggagtcccttatctggctattggcaaacatctctgtgggccggcaactgatttg
acgctaagatgttgcctgtctgaacaagacagtgaacataatatggaacagtgccttggc
aattattcccttaagggccttgctatagcgacttgctgccatcatctttgccagtggaag
cattatgcaaataaaaaattcatagtcgatttagggatcacaaaggaagaattccatgca
ataacgtggtttactagctgggcagtagatgctgaccatggatcagatctctctgttgac
ggcagattacatcttcaatctatggaacaggaacagtatgtaggggatgcaaatgggatt
gaagacgctgtgagaaacatgaaagctgttgacagggctgtgttgggttttatgtgtaag
cagatcattgatttgggaaggatgatgtgggcaagggaacggggactagacacacagctt
gttaagtatgtcccatcaagcatctctcctgaaaaccatttattgattgctaagcatgcc
aagtgctcatga
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