Hevea brasiliensis (rubber tree): 110641242
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Entry
110641242 CDS
T05150
Name
(RefSeq) nuclear pore complex protein NUP96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110641242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110641242
03036 Chromosome and associated proteins [BR:
hbr03036
]
110641242
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110641242
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110641242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
110641242
NCBI-ProteinID:
XP_021648587
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MASSLLPVPGDSSELWNTISNAPFGISCGLDCEVESSSLQAQHNKRIISPNGDKSCEILR
KIESSLPMLFSTDYYMVPSLTDLIARELLDPGYCSRVPDFTVGRLGYGCVKFLGMTDVRW
LDLDQIVKFHRHEIVVYEDVTAKPPVGQGLNKPAEVTLTLQIRLSDIHEGQLKDVAEKLR
TSMERQGAHFISFNPTISEWKFSVCHFSRFGLSDDDEEDIIMDDVVAVEEPLEMNDGDNP
ETNEETQVELEPTGPLLHHSLPAHLGLDPVKMKEMRMLMFPVEEDEEVGSFNGPSLQKLS
SSKERARNPLQSSAQKMSHRSSIPVARKTPLALLEYNPGSFNSTSPGTILMSQQNKGLPL
KTIKGEGFKLDLKHQTPTTGSHSRNIVDAGLFMGRSFRVGWGPNGVLVHCGAPVGCNGSQ
RLLSSVINVEKVAIDRVVRDENNNTKKDLVEFAFDSPLNLHKTINHETQEVKVGSFKLKL
QKVLSNRLILSEICRSYIDIIEKQLEVPGLSSSACLVLMHQVMIWELIKVLFSERENSGQ
SKSVGDDNEEDMMHDMKEGSLEIDQESLLLVRRAEFSCWLQESVCHRVQEEVSSLNDSSY
LEHIFLLLTGRQLDGAVEIAVSKGDVRLACLLSQAGGSTMNRADIARQLDLWRINGLDFK
FIENERIRLYELLSGNVHDALNDVKIDWKRFLGLLMWYRLTPHTSLPILFQTYQNLLDDG
RAPYPLPIYIDEGPVAEAIDFRGRHFDLSYYLMLLHANGEGEFGFLKTMFSAFSSTNDLL
DYHMIWHQRAVLEAVGVFSSNDLQVLDMGFVSQLLCIGQCHWAIYVALHMPFRDDYPYLQ
ATLIREILFQYCETWSSDESQHQFIENLDIPRSWLHEAMAVYFSYNGDLFKALEHYLECE
NWQKAHYIFITSVSHKLFLSANHSEIWRLATSMEDHKSEIENWDLGAGIYISFYLIRSSL
QENNNTMSELHLLQDSLENKSSTCRDFLGHLNESVAVFADRLPIDARVAYSKMAEEISEL
LLSDISEGSTRDAQLSCFDTVFNAPVLEDLRSNHLQDAVSLFTLYLSEIAT
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctctcctcccggttcccggggattccagtgaactatggaacacgatatcc
aatgccccttttggcatttcctgtggattggattgtgaggtagagtcttctagtttacag
gcccaacacaacaaaagaataatatctccaaacggtgataaatcatgtgaaattttaaga
aagattgaatcttcattacccatgttattctccacagattattatatggtaccttccttg
actgatttaattgcccgagaactcctggatcctggttattgtagccgagttccagatttc
actgttgggagattaggttatggatgtgtcaagtttcttgggatgactgatgttaggtgg
ttggatttggatcagattgtgaagtttcatagacatgaaatagtagtttatgaagatgta
acggctaaacctccagttggccagggccttaacaagcccgctgaagtgactttgactctg
cagataaggttgtcagatatccatgaggggcagctcaaagatgttgcagagaaattgaga
acgagtatggagagacagggtgctcatttcatttcatttaacccaacaattagtgagtgg
aagttctcggtttgccatttcagcagatttggattgagcgatgatgatgaggaagatatc
ataatggatgatgttgtagcagttgaagaaccacttgagatgaatgatggtgacaatcct
gagacaaatgaagaaacccaagtagaattagaacccactggacctctgcttcatcattct
cttccagcacatcttggccttgatcctgtaaagatgaaagagatgaggatgctgatgttt
cctgtagaggaagatgaggaggttgggagtttcaatggcccttcacttcagaaactgtcc
tctagtaaagaacgtgcaagaaatcctttacagagttctgctcagaaaatgagccataga
tctagtattcctgttgcaaggaaaacaccattagctctgcttgagtacaatcctggaagt
ttcaattctacttcccctggaaccattttgatgtcccaacaaaataagggcctgccttta
aagacaataaagggagaaggatttaagctagacctgaagcatcagacaccaacaactgga
agccattctcgcaacatagttgatgctggtttgttcatgggtaggtcatttcgtgtaggt
tggggcccaaacggtgtccttgttcactgtggtgctcctgttggatgtaatggttctcag
aggttattatcttctgtaattaatgtagaaaaggttgcaattgacagagtagtcagagat
gaaaataataacaccaaaaaggatctagttgagtttgcttttgactcccctttgaatctc
cacaaaacaataaatcatgaaacacaagaagttaaagtgggttcctttaaactaaagctc
caaaaagttctttctaatcgcttaatactttcagagatttgtcggagttacattgacatc
atcgaaaagcagctggaggtgcctgggctgtcatcatctgcttgtttggttttgatgcat
caagtaatgatctgggaattgataaaagttcttttttctgaaagggaaaatagtggacag
tcgaaatctgtgggtgatgataatgaggaagacatgatgcacgatatgaaggaaggttct
ctggaaattgaccaggaatcacttcttcttgtccgaagagcagagttcagttgttggttg
caagaaagtgtctgtcatcgtgtccaagaggaagtgagctctctgaatgattccagttac
cttgaacacattttcttactcttgactgggcgacaactggatggagctgtggaaatagct
gtttctaaaggagatgttaggctagcttgtttgctgagtcaagctggtgggtctacaatg
aaccgtgctgatattgcgcggcagcttgatctttggaggatcaatgggctagatttcaaa
ttcattgagaatgaaagaataaggctgtatgagttgctttctggtaatgttcatgatgca
ttaaatgatgttaagattgactggaagaggttcttaggactattgatgtggtatcggctc
acacctcacacgtccttgcccattctttttcagacttaccagaaccttcttgatgatggc
agggctccatatcctcttcccatttacattgatgaagggccagtagcagaggctatagat
ttcagagggagacactttgatctttcatattatcttatgcttcttcatgcaaatggagag
ggtgaatttggttttctgaagaccatgtttagtgccttctcgtcaaccaatgaccttctt
gactaccatatgatctggcatcagcgagcagtgttggaagctgttggtgttttctcctct
aatgatcttcaagttcttgacatgggatttgtttcacagctgttgtgtattgggcaatgt
cactgggccatctatgtggcccttcacatgccattccgtgatgattatccatatctccaa
gctacccttattcgggaaattttgtttcagtactgcgaaacttggagttcagatgagtca
caacaccaatttattgagaaccttgacattcctcggtcatggttgcatgaagctatggca
gtttacttcagttacaatggggatctcttcaaggccctggaacactatcttgaatgtgaa
aattggcaaaaggctcattatatttttataacttcagtttcccataaattgtttttatca
gctaaccactcagagatatggaggcttgcaacttcaatggaggaccacaaatctgaaatt
gaaaactgggacttgggagctggaatttatatatcattctatctcataagaagttcattg
caagaaaacaataatacaatgagtgaactgcatcttttgcaggattctcttgagaacaaa
agttctacctgtagagacttccttggtcacctgaatgaatctgtggcagtttttgctgat
cgattaccaattgatgcaagggtagcatactcaaagatggcagaggagatcagtgaattg
cttctatctgatattagcgagggctccacacgtgatgctcagttaagttgctttgacaca
gtgtttaatgcaccagttctggaagacctccgctcaaatcatctgcaagatgctgtgtcg
ctctttacattatatctttcagagattgccacttag
DBGET
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