Hevea brasiliensis (rubber tree): 110641397
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Entry
110641397 CDS
T05150
Name
(RefSeq) small RNA degrading nuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110641397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hbr03009
]
110641397
Ribosome biogenesis [BR:
hbr03009
]
Eukaryotic type
Pre-60S particles
RNases
110641397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
110641397
NCBI-ProteinID:
XP_021648789
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MPSPKRKSEEALASKKEESSDNINNGSNNYYDIYGPQAKAEVVFKMPESNSTLNLEDVQG
LVTWVLAEGFMPSWVFIKNKPLIPKVALLFIPGLDAALYLSQSKLLRSFKEFCGNPTALL
ALSCISDSMRTIDALLTCKTKRKRDGVDSVLRKSIKISEQEAKDSGTEDLSSVEFMKDLP
FPLTYYTLTARQLEENGYCINQPGFLHTLPAPSGSSPYDILALDCEMCITNEGFELTRVT
MVDIKGQVVLDKLVKPSNVIIDYNTRFSGMTCEMLNDVTTSLKDVQEEFLKLVYQETILI
GHSLENDLLALKISHDLVIDTALLYKHPRGGSYKTALRILAKKFLSREIQQSGAGHDSIE
DARAAMELALLKIKNGPDFGAPPSFIRTKLLTVLSECGKASSVIDDVSIVKRYASSSSHA
FPVNSDDEALSRAIKEVKNERVHFVWTQFSELNSYFKKQAEDEGKLNAKIAEMISLLTCQ
EKSVNSKGTKCIITSDLKEILTSMDARVRSLYSSLPTNTMLIICTGHGDTAVVLRLRKLL
REKKETPICREKIVKVLEELQAQAEVALCFVGVKN
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctccaaagcgtaagagcgaagaagctttagcctcaaagaaagaggagtcgagc
gataatattaataacggcagcaacaattattacgatatctatggaccacaagcgaaagca
gaagtagttttcaagatgccagaatctaactcaactctgaatttggaagacgtccaaggg
cttgtaacgtgggtgcttgctgaaggattcatgccatcatgggtatttatcaagaacaag
cctctaattccaaaagtggctttgcttttcatacctggcctggatgcagcgttatactta
tcacagtctaagttacttcgtagttttaaagaattctgtggcaatccaacagcacttttg
gctcttagctgtatatcagatagtatgcggacaattgatgcacttttaacatgcaagaca
aaaagaaagagagatggagttgattcagttttgaggaaatctatcaagatatctgaacaa
gaagcaaaagattctggtacagaggatttatcatcagtggaattcatgaaagatctacct
ttcccactaacgtattacacacttacggctagacaattggaagaaaatggatattgtatc
aatcaaccaggttttcttcatacccttcctgcaccttcaggttcttcaccctatgatata
ctggcactggattgtgaaatgtgtatcacaaatgagggctttgagctgacaagagtaacc
atggtggatatcaaaggacaggtggtattggataaattggttaaaccatcaaatgtcatc
attgactacaataccaggtttagtggaatgacatgtgagatgctgaatgatgtaactaca
agtcttaaagatgttcaggaagagtttctaaagctggtttaccaagagaccatcttgatt
ggccattcgctggagaatgatttgttagctctgaagatctctcatgacttggtgattgat
accgcattgttatacaagcatccccgaggtggttcttataaaactgctcttcgaattctt
gccaaaaaatttctttctagagagatacagcagtctggggctggacatgacagtattgaa
gatgcaagagcagctatggaactggcattgttaaagataaaaaatggacctgattttggt
gctccgccatcatttatacggacgaagcttcttactgttttgagtgaatgtggtaaagca
tcctctgtcattgatgatgtttccatagtgaagaggtatgcttcttcatcatcccatgca
tttcctgtgaactctgatgatgaagcgctttcaagagccattaaggaggtgaagaatgaa
cgagtacactttgtctggacccagttttcagagttgaattcctacttcaagaagcaagcg
gaggatgaagggaagctaaatgcaaaaattgcagagatgatatcattgcttacgtgtcaa
gagaagtctgtcaacagtaaaggcaccaaatgcattataacatctgatctcaaggaaatt
ctaactagcatggatgctagggtccgttccctatactcttcattgccaactaatacaatg
ctcataatttgcactggacatggggatacagccgttgtcctaagattgaggaaattgctg
agagagaagaaagaaaccccaatatgccgggagaagattgtgaaagtcttggaagagctt
caggcccaagctgaagtagctttgtgttttgtaggtgtgaagaactga
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