Hevea brasiliensis (rubber tree): 110641917
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Entry
110641917 CDS
T05150
Name
(RefSeq) polyadenylate-binding protein 3
KO
K13126
polyadenylate-binding protein
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03015
mRNA surveillance pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110641917
09123 Folding, sorting and degradation
03018 RNA degradation
110641917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110641917
03041 Spliceosome [BR:
hbr03041
]
110641917
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110641917
mRNA cycle factors
Stress granule specific factors
110641917
Spliceosome [BR:
hbr03041
]
Complex C
Other components
Complex C specific factors
110641917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_5
RBD_DEAH11
RRM_3
RRM_7
RBD_DGKtheta
TEX47
Motif
Other DBs
NCBI-GeneID:
110641917
NCBI-ProteinID:
XP_021649508
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MAVAAAAAVAASATVNASSVPVTPSPAVAAVTGGVGPFVNASLYVGDLEHNVNEGQLYDL
FSQVAQVVSVRVCRDQAKRSSLGYAYVNFSNPQDAANAMEALNFTPLNGKTIRIMFSHRD
PSIRKSGYANVFIKNLDTSLDNKALHDTFAVFGRVLSCKVAFDSNGQSKGYGFVQFENED
AAQSAIKRLNGMLINDKQVYVGLFVRRQERIRANGSPKFTNVYVKNLSETTTDEDLKKIF
GAYGTITSAVVMKDQNGKSRCFGFVNFQNPDSAAAAAEKLNGVTINDDKVWYVGRAQRKA
ERESELKAKFEQERIRRYEKLKGANLYLKNLDESINDEKLKELFAEFGSITSCKVMLDHQ
GQSKGSGFVAFSTPEEASRALNEFNGKMIERKPLYVAVAQRKEERKARLQAHFAQLRAPG
GISSLPSGIPGYHPGAPRLAPQQLYFGQGTPGMIPPQHAGYGFQQQLMPGVRPGVAPNFM
MPYHLQREGQPGQRMGVRRGGNPHQMQQQQLLHRNNNQGLRYMGNARNGIDSSSVPQGLV
GPVMPLPIEVSGNPIDIQQPVTISTLASALASASPDTRNEMLGDHLYPLVKRLQPDHVAK
VTGMLLEMDQTEVLHLIESPDALKKKVAEAMQVLREASASVVGDQLGSLGLTE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggcagcggcagcggttgcggcttcggctacagtaaacgcatcgtcagtg
cctgttacgcctagtccggctgttgctgctgtgacaggcggtgttgggccgtttgtgaat
gcgtcactctacgtgggagatctggagcataatgtgaatgagggccaattgtatgacctg
tttagccaggtggcccaggtcgtgtctgttagagtttgtagggatcaggcgaagcgatcc
tcactcggttatgcttatgttaatttcagtaatccccaagacgctgcaaatgctatggag
gctctgaatttcactcctttgaatggcaaaactatcaggattatgttttctcatcgagat
cctagcattagaaaaagtggatatgccaatgttttcatcaagaacctggacacgtcactt
gataacaaggcattgcatgacacttttgctgtctttgggagagtcctttcttgcaaggta
gcttttgatagcaacggtcaatcaaaagggtatggttttgtacagtttgaaaatgaggat
gctgcacaaagtgcaatcaaacggttgaatggtatgttgataaatgataaacaagtttat
gttggactttttgttcgacgtcaagaaagaattcgggctaatggatcaccaaagtttact
aatgtttatgttaagaacttgtctgagacaacaactgatgaggaccttaagaaaattttt
ggcgcttatggtaccatcaccagtgcagttgttatgaaggaccaaaatgggaaatccagg
tgttttggttttgtgaactttcagaacccagattctgctgctgcagctgctgagaagctg
aatggggtcaccatcaatgatgacaaagtttggtatgttgggagggcccaaaggaaagca
gagagggagtcagagttgaaagccaagtttgagcaggaaagaattcgtagatatgaaaaa
ctaaaaggtgcaaatttgtatctgaaaaatcttgatgaaagtattaatgatgaaaagctg
aaagaattatttgctgagtttgggtctataacatcatgcaaggtcatgcttgatcaccaa
gggcagagtaagggctctggttttgttgccttttctacacctgaggaagcttcaagagct
ttgaacgaattcaacggaaagatgattgaaaggaaacctctttatgttgctgttgcccaa
cgcaaagaagaaaggaaggctcgactacaggcacattttgctcaacttcgagctcctggc
ggaatatcatcattgccttctggaattcctggataccatccaggggcaccaaggcttgca
ccacagcagctttactttggtcaagggactcctggtatgataccccctcagcatgcagga
tatggcttccagcagcaactcatgcctggagttcgccctggtgtcgctccaaattttatg
atgccgtatcaccttcaaagagagggacaaccggggcagcggatgggagtgcggcgtggg
ggaaatcctcatcagatgcaacagcagcagctattgcaccgtaacaacaatcaaggctta
agatacatgggcaatgcaagaaatggcatagactcatcttctgttccacaaggtctagtg
ggtccagtgatgccattgcccattgaggtttcaggaaatcctattgatattcagcaacct
gttaccatctcaactcttgcttctgctttggcttctgcttccccagacacacgtaatgag
atgcttggtgaccatctttatccgctcgtgaagcgtcttcagccagatcatgtggcgaag
gtgactgggatgttattggagatggatcaaacggaggtactacatctcattgagtccccg
gatgctctgaaaaagaaagtggctgaagcaatgcaagtcctccgagaagctagtgcttct
gttgttggtgatcaacttggctcattgggactgactgaatga
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