Hevea brasiliensis (rubber tree): 110642346
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Entry
110642346 CDS
T05150
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110642346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110642346
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110642346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110642346
NCBI-ProteinID:
XP_021650044
LinkDB
All DBs
Position
Unknown
AA seq
256 aa
AA seq
DB search
MASKPGSAPKTYSPTLARKSRLPIFKDSDVDWVRPDGRGFHQCRPAFFRTGAVNAAPGSA
YAEFGNTKVVVSVFGPRESKKAMMYSDVGRLNCNVSYTTFATPVRGQGSDHKEFSSMLHK
ALEGAIMLETFPKTTVDVFALVLESGGSDIPVVISCASLALADAGIMMYDLIAGVSVSCL
GTNLIIDPILEEESCQDGNLMITCMPSRYEITQLTVTGEWSASKMNEAVQLCLDACSKLV
TIMRSCLKEAASATQD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgaaacccggttcagctccgaagacgtactctccgaccctggcccgtaaatca
cgactgccgattttcaaagactccgatgtcgattgggtccgtcctgatggccgaggcttc
caccagtgccgacccgccttttttaggactggtgctgtaaatgctgctccaggatcagct
tatgctgagtttggaaatacaaaagtcgtcgtgtctgtttttggtcccagagaaagtaag
aaagcaatgatgtatagtgatgtaggccggctgaattgcaatgtgagctatacaactttt
gctaccccagtccgtggacagggatcagaccataaagaattttcctcaatgcttcataaa
gctttggaaggtgcgataatgttggaaactttccccaaaacaactgtagatgtttttgca
ttggtgttggaatctggtggcagtgatattcctgttgtaatatcttgtgcaagccttgcc
ctggctgatgcagggattatgatgtatgacctcattgctggagtttcagtgtcatgtctt
ggtacaaacctcatcattgatccgattttggaagaggaaagctgtcaggatggaaaccta
atgattacctgtatgccttctcgttatgagatcactcagctgactgttacaggggaatgg
tctgcttcgaagatgaacgaggcagtgcagctttgccttgatgcttgctcaaagcttgtg
acaataatgaggtcatgtttgaaagaggctgcttctgctacacaggattag
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