Hevea brasiliensis (rubber tree): 110642388
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Entry
110642388 CDS
T05150
Name
(RefSeq) ABC transporter A family member 1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110642388
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hbr02000
]
110642388
Transporters [BR:
hbr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110642388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
110642388
NCBI-ProteinID:
XP_021650122
LinkDB
All DBs
Position
Unknown
AA seq
1815 aa
AA seq
DB search
MGTCRRQLKAMLRKNWLLKIRHPFVTAAEVHFCILVFLLQLLVHDVVRSKWHCDFIGFLC
RYIREDMFVEVGKGISPNFQLVLESLLAEGEFLAFAPDTEETRMMIHFLSMKFPLIREVS
RVYKDEVELETYICSDLYGACNGVKNCSNPKIKGAVIFHDQGPQLFDYSIRLNHTWAFSG
FPDVKTIMDVNGPYLNDLELGVSTIPTMQYSFSGFFTLQQVVDSFIIFSAQQTGTKAAGG
HIELPSSNSSISSLLKVPWMQYSPSKIRIAPFPTREYTDDEFQSIVKTVMGVLYLLGFLY
PISRLISYSVFEKEQKIREGLYMMGLKDGIFHLSWFIAYALQFAISSGIITGCTMNNLFQ
YSDKSVVFVYFFSFGLSAIMLSFLISTFFTRAKTAVAVGTLSFLGAFFPYYTVNDEAVPM
ILKVLASLLSPTAFALGSINFADYERAHVGLRWSNIWRGSSGVNFLVCLLMMWLDTLLYC
AVGLYLDKVIPRENGVRYPWNFLFKNCFWRKKSMIKHHVPSLEVKLNGKLSNLGNDTVEP
AVESISLDMKQQELDNRCIQIRNLHKVYATKGGSCAAVNSLHLTLYENQILALLGHNGAG
KSTTISMLVGLLPPTSGDALLFGKNILTDMDEIRNGLGVCPQHDILFPELTVREHLEMFA
TLKGVKEEILETSVTDMVDEVGLADKVNTVVRALSGGMKRKLSLGIALIGDSKVIILDEP
TSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLK
HQYGVGYTLTLVKSAPTASAAADIVYRHIPSAICVSEVGTEISFKLPLASSLSFESMFRE
IESCMRVSKSKISSSEDKNYLGIESYGISVTTLEEVFLRVAGCDYDGTDGFEQRSNILSS
GSVVPTASHNHGSKRVFGSKLLGNYRKFIGFISALVGKACGLMVATVLSFINFIGMQCCS
CCIISRSTFCQHTKALFIKRAISARRDRKTIVFQLLIPAVFLLFGLLFLKIKPHPDQQSV
SLTTSHFNPLLSGGGGGGPIPFDLSQPIAREVVKYIKGGWIQSFEKSVYKFPDSEGALAN
AIKAAGPTLGPVLLSMSEFLMSSFNESYQSRYGAIVMDDQNDDGSLGYTVLHNSSCQHAA
PTYINVMNAAILRLATGDKNMTIRTRNHPLPMTKSQHLQRHDLDAFSAAVIINIAFSFIP
ASFAVAIVKEREVKAKHQQLISGVSVLSYWASTYIWDFISFLFPSFLAIVLFYIFGKFKI
NIFRISPGFCFADGLASLALLRQGMKDKSSDTVFDWNVTGASICYLGIESIIYFLLTIGL
ELLPSHKLTPVTIKQCWRNFKNFWHGSSGFSEPLLKFPSEVVGVDFEEDIDVQTERNRVL
SGSVDNAILYLRNLQKVYPGGKYGMKVAVHSLTFSVQPGECFGFLGTNGAGKTTTLSMLS
GEESPTDGTAFIFGKDIRSNPKAVRRHIGYCPQFDALLEFLTVREHLELYARIKGVADYR
MEDIVIEKMVEFDLLRHADKPSFALSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAK
RFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNH
LELEVKPTEVSSVDLENLCQIIQERLLNIPSHPRSLLDDIEVCIGAVDCITSENASVAEI
SLSQEIIMLIGRWLGNEERAHTLLSTPVSDGVFGEQLAEQLVRDGGIPLPIFSEWWLAKE
KFSAIDSFVLSSFPGATVQACNGLSVKYQLPYRDGLSLADVFGHLEQNRNQLGIAEYSIS
QATLETIFNHFAASL
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atggggacttgccggaggcagttgaaggccatgcttcgcaagaattggcttcttaaaatt
cgtcacccttttgttacagctgctgaggttcatttttgcatccttgtttttttattgcaa
ttacttgttcatgatgttgtgagaagtaaatggcactgtgattttattggatttctctgc
aggtatattcgagaagatatgtttgtggaagtggggaaaggaatttcccctaatttccaa
ctagttctggaatcattgttggcagagggggagtttttggcttttgcaccagatacagaa
gaaacaaggatgatgatccacttcctgtcgatgaagtttcctttaattagggaagtttct
agagtctacaaagatgaagttgagttggaaacctatatatgctcagatctttatggtgcc
tgcaatggagtcaagaattgttcaaatcccaaaatcaaaggagctgttatatttcatgat
caaggtcctcagttatttgattatagcatacgtcttaatcacacgtgggctttctcaggg
tttcctgatgttaaaaccatcatggacgtaaatggtccttacctaaatgacttggaattg
ggtgttagtaccataccaacaatgcaatacagcttcagcggatttttcactctacagcag
gtagtggattcattcataatattttctgctcagcaaactgggactaaggcagcaggtgga
catatagagctgccatcatccaattcatctatctcttcgttgctcaaagtgccgtggatg
caatatagcccttcgaaaattagaattgctccctttccaactcgtgaatacactgacgat
gaattccaatcaattgtcaagactgtcatgggagtactctacctgttgggatttctctac
ccgatctctcgccttatcagctattcagtgttcgagaaggaacagaagataagagaaggt
ctctacatgatgggcttgaaagatggaatatttcatctctcttggtttattgcatatgct
ttacagtttgcaatttcatctgggattattacaggttgcaccatgaataaccttttccag
tatagcgataagtcggtggtgtttgtgtattttttctcctttggactcagtgcaattatg
ctgtcatttttgatctctacattcttcactcgagcaaaaacagctgttgcagttggaacc
ctttcttttcttggcgccttctttccctattatactgtgaatgatgaggctgtccctatg
atactgaaggtccttgcttctttgctttcacctacggcttttgctctaggatcgatcaac
tttgctgattatgagcgtgctcatgttgggcttcgttggagcaacatatggcgagggtca
tctggagtaaattttttggtctgtctcttgatgatgtggcttgacacgctgctatattgt
gctgttggtctataccttgacaaggttattccgagggaaaatggagtgcgttacccttgg
aacttcttattcaagaattgcttctggagaaagaaaagtatgatcaaacatcatgtccca
agtttggaagttaaacttaacggcaagctttctaacttgggaaatgacactgttgaacct
gctgttgagtcaataagcttggatatgaaacaacaagaacttgacaacagatgcatccaa
ataaggaacctgcataaggtgtatgctactaaaggtgggagttgtgctgctgttaattca
ctgcatctcaccttgtatgaaaatcagattcttgctcttcttggacacaacggagcgggc
aaaagcacaactatttcaatgcttgttggtcttcttcctcctacttcaggggatgcgttg
ctgtttggaaagaatattctgacagacatggatgagatacggaatggacttggtgtgtgc
ccccagcatgatattcttttcccagaactgactgtgagggagcatttggaaatgtttgct
acgctgaagggtgtaaaggaagagattctggagaccagtgtaactgatatggttgatgaa
gtgggtttggctgacaaagtgaacactgttgtgagggctctttccggtggcatgaaaagg
aaattatctcttggaattgccctgataggagacagtaaggttataattcttgatgaacct
accagtggaatggatccatattcgatgcgattgacatggcaattaatcaaaaaaataaaa
aagggcaggataattttgctaacaacccactcaatggatgaagctgatgaactaggagat
cggatagctatcatggctaatggttctttgaaatgctgtggaagctctctcttcttgaag
catcagtatggggttggttatactcttactttagtgaagtctgcacctactgcctctgca
gctgctgatattgtttaccgccatattccatcagcaatatgtgtgagtgaggttggaact
gagatttcctttaagcttcctttggcatcttccttgtcctttgagagcatgttcagggaa
attgaaagttgcatgagagtctcgaagtcaaaaataagtagcagtgaggacaaaaattat
cttggcattgagagttatggaatctcagtcacgactctggaggaggtatttctgagagtt
gcaggatgcgactatgatgggactgatggtttcgagcagaggagtaatattctttcatct
ggttctgtggttcctacagcttctcacaatcatggctcgaaaagagtttttggttccaaa
ctcctaggaaattatagaaagtttatcgggttcatttctgcattagtggggaaagcatgt
ggtttaatggttgcgacagttttaagtttcattaattttataggcatgcagtgctgtagc
tgttgtatcatttcaagatcaacattttgtcaacataccaaggcattatttataaagagg
gcaatatctgctaggagagaccggaaaacaattgttttccagcttctaattcctgctgta
ttcttgctttttggtcttctttttctcaaaattaagccacatccagatcagcaatctgtt
agcttgacaacttcacattttaatcctctcttaagtggaggtggtggtggtggtcccatt
ccttttgatctgtcccagcctattgcaagagaggttgtaaaatacattaaaggtggttgg
attcaaagctttgaaaagagtgtgtataaattccctgattcagagggggcattagctaat
gccatcaaagctgcggggccaactttgggacctgttttactttcaatgagtgaattctta
atgtctagctttaatgaatcttaccagtcgaggtatggagcaattgtgatggatgatcag
aatgatgatggaagtttgggatatactgtactgcataatagttcttgtcagcatgctgct
ccaacttatatcaatgtaatgaatgcagcaattcttaggcttgctactggtgacaaaaat
atgacaattagaactcgcaatcaccctttgccaatgacaaagagccagcacttgcaacga
catgacttggatgccttctctgctgctgttattattaatatcgccttctcatttattcct
gcttcatttgctgttgccattgtgaaggaacgtgaagtgaaggccaagcaccaacagttg
attagtggggtttctgtactttcatattgggcttctacatatatttgggacttcatcagc
ttcttatttccttcatttctcgcaatagttcttttctacatctttggtaagtttaaaata
aatatcttcagaatatcacctgggttttgcttcgctgatggacttgcttcactggccctt
ctacgacaagggatgaaagataaatctagtgacacagtttttgattggaatgttactggt
gcctccatttgttaccttggcattgagagcattatttactttctcttgacaattgggctt
gaactgttgccttctcacaagttaactccagttacaatcaagcaatgttggaggaatttt
aaaaatttctggcatggttcttcaggattttctgaacctcttctaaaatttccgtcagaa
gttgttggtgttgactttgaggaagatatagatgtgcaaacagaaagaaacagagtacta
tcaggatctgttgacaatgccatcctttacttacgcaatcttcagaaggtatatcctgga
ggaaaatatggcatgaaagttgctgtgcattcattgactttctcagttcaaccaggagaa
tgttttggatttttaggaacaaatggagctgggaagactacaactctgtcgatgttatct
ggagaagaatctccaactgatggaactgcctttatttttggcaaagatatacgttcaaat
cccaaggctgttcgtcggcatattggatattgcccccaatttgatgctttattggaattc
ttaactgtcagagagcatcttgagctttatgcaagaataaaaggagttgcagattacagg
atggaagatattgtcatagaaaagatggtggagtttgacctgttgaggcatgctgataaa
ccatctttcgcccttagtgggggaaacaagcgcaaattatctgttgcaattgcaatgatc
ggagatcctccaatagtaattcttgatgagccatcaacaggtatggatcctattgccaaa
cgattcatgtgggaagtgatatcccgtctatccactagacaaggaaagacggctgtaatt
cttacaacccacagcatgaatgaagctcaggcactgtgcacacgtattggaataatggtt
ggaggcagattaagatgcattggaagtccccagcatctgaaaacacgatttgggaatcac
cttgagctagaggttaaacccactgaggttagctcagtggacttggaaaatctttgccaa
attattcaagaaaggcttctgaacattccttcacatccaagaagcttacttgacgacatt
gaagtttgcattggagcagttgactgcatcacatctgaaaatgcttcagtggcagagatc
agcttgtcccaagaaataataatgttgattggacgctggcttggcaatgaagaaagagcg
cacacacttttatcaacgccagtttctgatggggtttttggtgaacagttagcagagcag
ttggttcgagatggtgggataccactaccaatattttctgagtggtggttagccaaagaa
aagttttcagctattgattcatttgtgctgtcttcatttcctggtgctacagttcaagcg
tgcaatggtttgagtgttaaatatcagctgccatacagagacgggctctcgcttgcagat
gtttttggacacctggagcaaaatagaaatcaactgggcatagcagaatacagtatcagc
caggcaactctcgaaaccatctttaatcattttgcagcaagtttgtga
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integrated database retrieval system
