Hevea brasiliensis (rubber tree): 110642882
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Entry
110642882 CDS
T05150
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
110642882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110642882
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
110642882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Peptidase_M74
Motif
Other DBs
NCBI-GeneID:
110642882
NCBI-ProteinID:
XP_021650757
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
METVGGLGQGKVRALIEKATNSTEAEVEPRLLKAIKSVVRYSDSELRLAAQTLMDLMKCD
HSQVRYLTLLIIDQLFMRSKLFRTLLVENLDQLLSLSVGFRRNLPLPAPPAVASVLRSKA
IEFLEKWNDSFGIHYRQIRLGFDYLKNTLRFQFPNIQANAAQERREREMRSKEILQSKFE
ILKGNLSSIKEEIQSTLDEIGECLEIVRTEQETMPPGPLDDEDFVEFRPSELRQIRLDSL
REGEKIHENSENKVVFDALRELYKLLVTKHLVSVQEWISVLIRVEVPDNRSRDSVLKEFI
DIQNRLQSVKKKCVESGYALPDTTKREKDEEEDFWEEGKIESIKLESSNALNKLNENFAV
ASTSGQTKNDSPESSKGKAKCDQSQSCKGTDSSSLRSKLLAEAPVVKWGNFLNNWDSNRV
VLANQRGLELESHWGRVDYNAVIPAEKIAELNIRATIYEEEQVEIQPCHAPLHKGGLCQR
RDLRVCPFHGPVIPRDDEGNPINKSTSTSDTTLDSDLIEQLAKQAVKNVRNRENEEANKR
KLDKQSQKRAKLAKIREHNEAVLRDAALASTSNSVFAGEDVKATTGGRLARNKKKSLASM
LHKKESTKDRLAQRLLNTRARDATIRLVTLGEDANYREAFPNQW
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgtaggaggtttagggcaagggaaggtcagggcgttgatagagaaggccaca
aattcgacggaggcagaggtggaaccccgcctcctcaaggccatcaaatcggtggtccgg
tattctgattcggagctccgactggcggcacaaaccctaatggatctcatgaaatgcgac
cactctcaggtcaggtatctcacacttctcataattgatcaacttttcatgcgatcaaag
ctttttaggacccttcttgttgaaaacttggatcagctattgagtttaagtgttgggttc
agaaggaatctgccgcttcctgctccaccagctgttgcatctgttttgcgttcaaaggca
attgaatttttggagaagtggaatgattcatttgggattcattacaggcagattcgatta
ggttttgactatcttaaaaacacgcttcggttccaatttcctaatatccaggctaatgct
gcgcaggaaagaagggaaagagagatgagatcaaaagagattctacagagcaagtttgaa
atattgaagggaaatttatcttcaataaaggaagagatacagtcaacgttagatgagatt
ggggagtgtttagaaattgttcgtactgaacaggaaactatgccacctggtcctttagat
gatgaagattttgtagagttccgcccttcagaattacgccagatccgtcttgattcattg
agagaaggagaaaagattcatgagaacagtgagaacaaagtggtttttgatgcattgagg
gagctgtacaagcttctagtaacaaagcatctggtttcagtccaagaatggatctctgtt
cttataagggtcgaagtaccagataatagatctagagattcagtgctgaaggaattcatt
gatatccaaaatcgtctccaatctgtcaagaagaaatgtgtagaatcaggttatgctctt
ccagatactacaaagcgtgaaaaggatgaggaagaagatttttgggaggagggtaaaatt
gaatcaattaaacttgagagctctaatgcactcaataagctaaatgaaaactttgctgtg
gcttcaacttctgggcagacgaaaaatgattctcctgaaagcagtaaagggaaggcaaaa
tgtgatcagtcacagagttgcaaaggaactgattcaagctcacttcgaagtaagctttta
gctgaagccccagttgtaaagtggggcaatttcttgaataattgggattcaaatcgggtt
gttcttgccaaccagaggggcttagagcttgaaagtcactggggtagggtagactacaat
gcagttattccagcagaaaaaattgcagagctaaacattcgtgcaactatttatgaagaa
gagcaagtagaaatacaaccatgccatgctccattacacaaaggtggactttgtcagaga
agagatttgagagtttgccctttccatggacccgtcataccccgagacgatgaaggaaat
cctatcaataagagcacttcaacaagtgatacaactcttgattctgatttaatagagcaa
ttagcaaaacaagctgtaaagaatgttcggaatagagagaatgaggaagctaataaaaga
aaattggataagcaatcacagaagcgtgcaaagcttgctaagattcgtgaacataatgaa
gcggttctgagagatgctgcattggcatcgacctctaattctgtatttgctggggaggat
gtgaaggcaaccactggggggaggttggctagaaacaaaaagaaaagccttgcatcaatg
ctgcacaagaaagaatccacaaaagataggttagcacagagacttttgaatacccgggca
agggatgctacaataaggctggtgacacttggtgaggatgcaaattacagagaagctttc
cctaatcaatggtag
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