KEGG   Hevea brasiliensis (rubber tree): 110643244
Entry
110643244         CDS       T05150                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16 isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
hbr  Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hbr01009]
    110643244
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hbr03036]
    110643244
Enzymes [BR:hbr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     110643244
Protein phosphatases and associated proteins [BR:hbr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     110643244
Chromosome and associated proteins [BR:hbr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    110643244
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 110643244
NCBI-ProteinID: XP_021651241
LinkDB
Position
Unknown
AA seq 1270 aa
MFQASLFEKISHINFIPDLTLSSPLNLLMGTELMRFCIKEENDDIPSVPPGFESLAAFTL
KRVQDGEKQETQDVITSSVSISTSDLQSVKIEMDTDSRADTKITRSLRRRACINYGQLGN
NSSEDESESAKLNQNLSLRYHLPKGVIRGCAQCRNCQKVTATWRPEYARRPDLEDAPVFY
PTEEEFEDTLKYIASIRPKAEPYGICRIVPPPSWKPPCPLKEKSIWEGSTFATRVQRVDK
LQNRDSMKKMSKLYNHTRKKRRRCMGMAVDCGVDSGNISGCNDVGVCQAESFGFEPGPEF
TLNTFQKYADDFKALYFRKNDNIVSKGGKAAVLHENWEPTVENIEGEYWRIVEKATEEIE
VLYGADLETGVFGSGFPKKSGQFGSDTNERYAKSGWNLNEFPRLPGSVLSYESGDISGVL
VPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDAIKLEEAMRKHLPDLFE
EQPDLLHKLVTQLSPSILKSEGIPVYRCLQNSGEFVLTFPRAYHSGFNCGFNCAEAVNVA
PVDWLPHGQIAIELYRKQGRRTSISHDKLLLGAAREAVKAHWELNLLKKNTADNLRWKDL
CGKDGILAKALKERVEMERVRREFLCNSSQALKMESNFDATSERECIVCLFDLHLSAAGC
HCSPDKYACLDHAKQMCSCGWGTKFFLFRYDISELNILVEALEGKLSAVYRWARLDLGLA
LTSYVSKDSLQDCKVSYLPDGRALEEVRSKPSTYLLEDLDSKGIAREITMTSMKIFDGMA
SVEKKIPLESSTSRSYFQATEKQSHNSKLKKESILLSTNLRTREDVSYTGELTSSEYGMK
KPSTLAHDNIIVLSDDEGDEPKHLELSKRSTSDDSPCNDNKDSILIASVTDAEVISKNDV
SSLDGQGKNCLLDPVKVKDDRHQHSEVVLESNVADGSCHAGSTSAGCGKNVQDSSNMRMT
SKDPNMVNARCTLPQHCGTANPNDDDNMGANATSNPVDNSRVMAGSPSCSQNNLDRYIRQ
KGPRIAKVVRRINCNVEPLEFGVVLSGKLWCNSQAIFPKGFKSRVRYTSVLDPTNMCYYV
SEILDAGQKGPLFMVSMEHCPSEVFIHISAARCWEMVRERVNQEITKQHKLGRMNLPPLQ
PPGSLDGFEMFGFSSPAIVQAIEALDRNRVCTDYWDSRPYSRPQGQIPQPSQPKESGGYV
KGTSEEHDNRGTPGSNLLPHGVDDTILRGLFKKANPEELYTLSRILNDDKPKVDGGLMTL
LNEEIHNRPR
NT seq 3813 nt   +upstreamnt  +downstreamnt
atgtttcaagcttccttgtttgaaaaaataagccacataaattttattccagatttgacc
ttatcctctcctctgaatttattgatgggaacagaactcatgagattttgcattaaggaa
gagaatgatgacatcccatcagttccacctggtttcgagtcacttgctgctttcacctta
aagagggtccaagatggtgaaaaacaagaaactcaagacgtaattacctcttcagtctcc
ataagcacttctgacttacagtcagtaaagatagaaatggataccgacagtcgtgctgac
acaaaaatcacaaggtctctccggcgtagagcttgtataaactatggacaattgggcaat
aatagttcagaggatgaatctgaatctgcaaagcttaatcaaaatcttagtttaaggtat
catctaccaaagggggttattcgtggatgtgcacaatgcagaaattgccaaaaggtcact
gcaacatggcgtcctgaatatgctcgcaggcctgaccttgaggatgctcctgtattctac
cctactgaagaggagtttgaagatactttgaaatacatagctagcatacgaccaaaagct
gaaccgtatggaatatgtcgtattgttcctcctccttcttggaaacctccctgtcctctg
aaggaaaaatctatttgggagggttctacttttgctactcgtgtccagagggttgacaaa
ctacagaatcgagattcaatgaaaaagatgtcaaagctatataaccataccaggaagaaa
aggagaaggtgcatgggaatggcggtagattgtggggtagatagtggaaatatctcaggg
tgcaatgatgttggtgtttgtcaggctgagagttttggattcgaacctggtccagagttt
actctgaacacatttcagaaatatgcagatgatttcaaggccctgtacttcaggaagaat
gataacatcgttagtaagggaggtaaggcagcagtgcttcatgagaactgggagccaaca
gtggagaatattgaaggtgaatactggcggattgtagagaaagcaactgaagaaatagag
gtgctttatggggctgatctagaaactggggtttttggcagtgggtttccaaaaaagtct
ggtcagtttggttctgatacaaatgaacgttatgcaaagtctggttggaacttgaatgag
tttccgaggcttcctggatctgtcctttcttatgaaagtggtgatatatctggtgtttta
gtgccatggttgtatataggaatgtgcttttcctccttctgttggcatgttgaagaccat
cacttatattcactgaattacatgcattggggtgctccaaaaatgtggtatggggtccca
gggaaggatgctattaaattggaagaggctatgaggaagcatttacctgatctgttcgaa
gagcaacctgacttgcttcataagctggtgacacaactttctccttctatactaaaatct
gaagggataccagtctatcggtgtttacaaaattcaggagagtttgttctaacctttcct
cgagcatatcattcagggtttaattgtggcttcaattgtgcggaggcagtaaatgtagcc
cctgttgactggttgccccatggacagattgctatagagctttatcgtaagcaggggcga
aggacttccatctcccatgataaactgttgcttggagcagcaagggaagcagtgaaagct
cattgggaacttaatttactgaaaaagaatacagcggataacttaagatggaaagatttg
tgtggcaaggatggaatattagcaaaagcactcaaggaacgtgtggagatggagcgtgtg
aggagagaatttctttgcaattcttcgcaggcactaaagatggagagcaattttgatgcc
acaagtgaaagggaatgcattgtctgcctctttgatttgcacctatctgcagcaggatgt
cattgttcgccagataagtatgcatgcttggatcatgcaaagcaaatgtgttcttgtggt
tggggtaccaaatttttcctgtttcgctatgacatcagtgaattaaacatacttgttgaa
gcattggaaggaaaattgagcgcagtttacagatgggcaagattagatcttggactggcc
ctgacatcttatgtttctaaagacagtttgcaagattgtaaagtatcttacttgccagat
ggaagagcacttgaggaggtgagatcgaaaccatcaacgtatcttcttgaagatttagac
agtaaaggaatcgccagggaaattacaatgacttcaatgaagatctttgatggaatggct
tcagtagaaaaaaagatacctcttgaatcatctacatcccgtagttattttcaagcaact
gagaagcaaagtcacaattcaaagttaaaaaaggaatccatccttttgtctaccaattta
agaactcgcgaagacgtgtcctacactggagaactcacttcatcagaatatggaatgaaa
aaaccttcaactttggcccatgataatattattgtgctgagtgatgatgaaggcgatgaa
ccaaagcacttggaactttctaaaaggtctacttctgatgacagcccctgtaatgacaat
aaagattcaatcttaattgcctctgtgactgatgcagaagtgattagtaaaaatgatgtc
agttccctggatggacaagggaagaactgtttgttggatcctgttaaagtgaaggatgac
cgtcatcaacatagtgaagtagttcttgaatctaatgtggcagacggttcttgccatgca
ggctctaccagtgcagggtgtggtaagaatgttcaggattcctcaaacatgagaatgacc
agtaaggatccaaatatggtaaatgctaggtgtacacttccacagcattgtggcactgca
aatcctaatgatgatgataacatgggagcgaatgccacctcaaatccagtggacaattca
agagttatggcaggtagcccatcttgctcacaaaataatttggaccgctatatccgccag
aagggtccacgcattgccaaggtagtgcgaaggattaactgcaatgtggagcctctggaa
tttggagttgtactttccggaaaattgtggtgtaacagccaggcgatatttcccaaagga
tttaagagccgggttagatacacaagtgttttagatccaacaaatatgtgttactatgta
tcagaaattctggatgccggacaaaaaggacctctgttcatggtttccatggagcattgt
ccaagtgaggtattcattcacatttcagcagccagatgctgggaaatggtgagagagaga
gtaaatcaagagatcacaaagcagcataaattgggaagaatgaacttgccacctttgcaa
cctcctggaagtcttgatggctttgaaatgtttgggttttcttcaccagcaatcgtacag
gccatagaagcgttggatcgtaatcgagtttgtacagattattgggactccaggccctac
tcacgacctcagggtcagattccacaaccttctcaacccaaagaaagtggaggatatgtc
aaggggacatctgaggaacatgataatagagggactcctgggagcaatctgctacctcat
ggagttgatgatacgatacttcgaggcttattcaagaaggcaaacccagaagaattatac
acactgagtcgaattctaaatgatgataagccaaaagttgatggaggcttaatgacactt
cttaatgaagagattcacaatcgccctagatag

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