Hevea brasiliensis (rubber tree): 110643443
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Entry
110643443 CDS
T05150
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110643443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hbr04121
]
110643443
Ubiquitin system [BR:
hbr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110643443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
F-box
LRR_NXF1-5
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
110643443
NCBI-ProteinID:
XP_021651512
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All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MLRMARSLPEEVLEHVFSFIHSDKDRNAISMVCKSWYEIERWCRRRIFVGNCYAVNPSMV
IRRFPEVRSVELKGKPHFADFNLVPDGWGGYVYPWIAAMANAYPWLEEISLKRMVVTDET
LELIAKSFKNFKVLVLSSCEGFSTDGLAAIAANCRNLRQLDLRESEVDDPSGHWLSHFPD
SFTSLVSLNISCLGSEVNFSALEHLVGRCPNLRTLRLNRAVPLDRLANILRRAPQLVELG
AGTYSAELRPDVFSSIAGAFSGCKELKSLSGFWDVVPGYLPAIYPICSSLTSLNLSYATI
QSPDLVKLVSQCQSLQRLWVLDYIEDIGLEALAAFCKDLQELRVFPSEPFALEPNVSLTE
QGLVSVSEGCLKLHSVLYFCRQMTNDALVTIARNCPKMTRFRLCIIEPRTPDYITLHPLD
DGFGAIVEHCKDLRRLSLSGLLTDRVFEYIGTHAKKLEMLSVAFAGDSDLGLHHVLYGCE
NLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLGQKMPRLNIEVIDER
GPPDSRPESCPVEKLYIYRTLAGPRFDMPGFVWTMDEDSALRFS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaatggcaaggtcgttacctgaggaggtgctggagcacgtgttctccttcata
cacagcgacaaggaccgtaacgcgatttcgatggtgtgcaagtcctggtacgagatagag
cggtggtgcaggaggaggatttttgtcgggaactgctacgcggttaatccttcaatggtg
attaggagatttccggaggtgagatcggttgagctcaaaggtaagcctcacttcgccgac
ttcaatctggtccccgacggttggggtggttatgtttatccgtggatcgcggccatggct
aacgcatacccttggctcgaggagatcagtttgaagagaatggtggttacggatgagacc
ttggagctcattgctaagtcctttaagaatttcaaggttttggtgctttcttcctgtgag
ggtttctctactgatggacttgctgccattgctgccaattgcaggaatctgaggcagctt
gatttgcgggagagtgaggtggatgatcctagtgggcattggttgagtcactttcctgac
tcattcacatcactggtgtctcttaacatttcctgcttagggtctgaggtgaatttctcg
gccctggaacacctggtgggtcggtgccccaatttgaggactcttcgactcaaccgtgca
gtgccccttgacagacttgctaacatacttcgcagggcaccccagctggtagagttgggc
gcaggcacctactcagccgagctacggcctgatgtcttctcaagcatagctggggccttt
tctgggtgtaaggaactgaaaagtttatctgggttttgggatgtggttccaggttacctt
ccagcaatttatcctatttgctctagcctaacatcattgaacttgagctatgccactatc
caaagccctgatcttgttaagcttgttagtcagtgtcaaagtttgcagcgcttgtgggtg
ctggattacattgaggatattggacttgaagctcttgcagcattttgcaaggacctgcaa
gaattgagggtgttcccatctgaaccgtttgccttggaaccaaatgtatccttgacagaa
cagggccttgtctctgtttctgagggctgtcttaagctccactctgttttgtatttttgc
cgtcaaatgactaatgatgccttggtaacaattgccaggaactgtccaaaaatgactcgc
tttcgtctttgtattattgagccacgaacccctgattatataacccttcatccattagat
gatggttttggagctattgttgaacactgcaaggatctccggcgcctttcactgtcaggt
ctcctcactgatcgtgtgtttgagtacattggaacacatgccaaaaaactagagatgctt
tctgtagcttttgctggagatagtgatctgggactccatcatgtgctgtatgggtgtgaa
aaccttcgcaaactagagattcgagattgtccgtttggggacaaggctcttttggccaat
gctgcaaagctggagacaatgcgatccctttggatgtcttcttgctcagtgagttttgga
gcatgtaagcttctaggtcagaagatgcctaggcttaatattgaagttattgatgagagg
ggacctccagattcaaggccagaaagttgtcctgtagagaagctttacatttataggact
cttgctgggcctcgatttgacatgcctggttttgtctggaccatggatgaagactctgca
ttgaggttttcttga
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