Hevea brasiliensis (rubber tree): 110643528
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Entry
110643528 CDS
T05150
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic-like isoform X1
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hbr03041
]
110643528
Spliceosome [BR:
hbr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110643528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_long
PPR_1
DUF4268
DUF6272
Motif
Other DBs
NCBI-GeneID:
110643528
NCBI-ProteinID:
XP_021651621
LinkDB
All DBs
Position
Unknown
AA seq
836 aa
AA seq
DB search
MFLGRTQESALTVLHNFNNSLVNPNPHITLTLPMRTSLFSSLSFLRSFTISLSCHHLHLL
TRQPLFLLRFPTSSLTHHNRLPFRSLKCFNISTEQLACESHSPSAYEEKWDFSSYIDNET
DVFKFDDDPGYSGAGGDKKHMDSPALEVRELEELPEQWRRARLAWLCKQLPAHKAGTLVR
ILNAQKKWMRQEDATYVAVHCMRIREHEAGFRVYKWMIQQHWYQFDFALATKLADYMGKE
GKFAKCREIFDSIINQGLVPSESTFHILVIAYLSAPVQGCLEEACSIYNRMIQLGGYQPR
LSLHNSLFRALISKPGEHSKHYLKQAEFIFHNLVTSGLEIQKNVYGGLIWLHSYQDNIDK
GRIASLREEMKQAGIEEDKELLLSVLRACSREGDVEEAERAWLKLFRIDGGLPTQAFVYR
MEVFAKVGEYLKSLEIFREMQESLGSASVAAYHKIMEVLCQAQEMELAELLMQEFIKCGM
KPLMPAFIDLMNMYLNLNLHDKLKSAFSACLETCRPNRTIYNIYLDSLVKSGDLHKAEDT
FNHMCSNETVGVDTRSCNIILKGYLSSGDYMKAEKIYDLMCQKKYDIESSLMEKLDYILS
LSRKEVKKLVSLKLSKDQREILVGLLLGGLQIDSDEERKKHKIRFEFNETSSTHSVLRRR
LYDQYHEWLHPSCKLSDGSGDVSYRFSTISHSYFGFYADQFWPKGRAMIPNLINRWLTPQ
VLAYWYMYGGHRTSSGDILLKLKGSREGVAKVVENLKAKSLNCRVKRKGRVFWIGFLGSD
SSWFWKLVEPYILDDLKDFLRAGDKTWENNAAENTNFNSGSDFDEGASECSDNDNS
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgggcagaacccaagagtccgctctcaccgttctacacaattttaataattcc
ctcgtaaaccctaatccccacataaccctcactctccccatgcgtacttcccttttctca
tctctctccttcctccgctctttcactatttccctctcttgccaccacctccatctctta
acccggcaacccctcttccttctccgttttcccacatcctctcttacccatcacaatcgt
ctcccatttcggagtctaaagtgtttcaatatttccactgaacagttggcgtgcgaatcc
cattctccttccgcatatgaagagaaatgggacttctcaagctacatcgacaacgaaact
gacgtttttaaattcgacgatgatccgggttattcgggcgctggtggagataagaagcac
atggattcaccggcgcttgaggtcagggagttggaggagttgccggagcaatggaggcga
gcgagattggcctggctgtgtaaacagttgccggcgcacaaggcgggaactttggtgagg
atacttaacgcccagaaaaagtggatgaggcaggaggatgctacctatgttgcggttcat
tgtatgcgcattcgcgaacacgaggctgggtttagggtgtacaaatggatgattcagcaa
cactggtatcaatttgattttgctctggctacaaagctagcagattacatgggcaaggaa
ggaaagtttgcaaaatgcagggagatatttgacagtatcatcaatcagggacttgtgcct
agcgagtccacatttcacattttggttattgcatatcttagtgcaccagtacaaggctgc
ttggaagaagcatgtagcatttacaatcgcatgattcagttgggtggttaccagccgcga
ctcagtttgcacaattctctctttagagctcttataagcaaaccaggagaacattcaaaa
cattatctcaagcaggctgagtttatttttcataatttggtgacatctggacttgagata
cagaagaatgtttatggtggcctaatttggctacatagctatcaagacaacatagataaa
ggaaggattgcatcactaagggaagagatgaagcaagcaggaatagaagaggacaaggaa
ctgcttttatctgttctgagagcttgctcaagggagggtgatgtggaggaagcagaaaga
gcttggctcaaactcttcaggattgatggtggtctccccacacaagcttttgtgtatagg
atggaagtctttgctaaggttggagaatatttgaaatctttggagatattcagggaaatg
caggagagtttgggctctgctagtgttgcagcgtatcataaaatcatggaagtgttatgt
caagctcaggaaatggaattagcagaattgcttatgcaggagttcattaagtgtggtatg
aagccccttatgccagcttttattgatctgatgaatatgtaccttaatttaaatttgcat
gataaactgaagtcagctttctctgcatgcctcgagacctgtcgaccaaaccggactatt
tacaatatatacctggattctttggtaaaatccggtgatcttcacaaagcagaagatacc
ttcaaccatatgtgtagtaatgaaactgttggtgttgacaccagatcatgcaacattatt
ctaaaagggtacctctcttctggagattatatgaaggcagagaagatatatgatctgatg
tgccagaaaaaatatgatattgagtcctcattgatggaaaagcttgactatatactgagc
ttgagcaggaaagaggttaagaagcttgtaagtctcaagctaagcaaagatcagagagaa
attttagtgggattgctgctaggtggtttgcaaattgattcagatgaagaaaggaagaaa
cacaagattcggtttgagttcaatgagacttctagcacacattctgttttaaggagacgt
ttatacgaccaataccatgagtggttacatccctcctgtaagcttagtgatggtagtggt
gatgtatcttacagattttctactatctcgcactcttactttggtttctacgcagatcag
ttttggccaaaaggtcgggccatgataccaaatctaatcaataggtggttgacaccacaa
gttcttgcatattggtatatgtatggtgggcacagaacatcatctggggatatcttgttg
aagcttaaaggaagtagggagggggtagcgaaggtggttgaaaatttgaaagcgaaatct
ctcaattgcagggtgaagagaaaagggagagttttttggataggctttttaggaagtgat
tcctcatggttctggaaacttgtggaaccttatattttagatgatttgaaagattttcta
agagcaggtgataagacctgggagaataatgcagctgaaaatacaaactttaatagtgga
tctgattttgatgagggggcatctgaatgcagtgataatgacaattcatag
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