Hevea brasiliensis (rubber tree): 110643737
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Entry
110643737 CDS
T05150
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03015
mRNA surveillance pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110643737
09123 Folding, sorting and degradation
03018 RNA degradation
110643737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110643737
03041 Spliceosome [BR:
hbr03041
]
110643737
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110643737
mRNA cycle factors
Stress granule specific factors
110643737
Spliceosome [BR:
hbr03041
]
Complex C
Other components
Complex C specific factors
110643737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_occluded
RRM_3
RRM_RdRP1_2
RBD_DGKtheta
SET_assoc
Motif
Other DBs
NCBI-GeneID:
110643737
NCBI-ProteinID:
XP_021651905
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MAQVQVQPQSPVSVPNGVASNGMNQFMSTSLYVGDLDHNVTETQLYDLFNQLGQVVSIRV
CRDLTSRRSLGYGYVNYSNIHDAARALEVLNFTPVNGKPIRIMYSHRDPTIRKSGAGNIY
IKNLDKAIDNKALHDTFSTFGNILSCKVVTDSLGQSLGYGFVQFDNEESAKSAIDKLNGM
LLNDKQVYVGPFLRKQERESAIDKTKFNNVYVKNLSETTTDEDLKKIFGEYGTITSAVVM
RDGDGKSKCFGFVNFENPDDAARSVVALNEKTFDDKEWYVGKAQKKSEREIELKGQLEQT
LKEKVDKFEGLNLYVKNLDDSITDDKLKDLFSEFGTVTSCKVMRDPSGVSRGSGFVAFST
AEEASRALAEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRSSAMAPAVGPRMPIYP
PGTPGIGQQLFYGQSPPAILPPQPGFGYQQQLVPGMRPNFFVPMVQPGQPAQRPGSRRFG
AGPVQPQQPLPLMQQQMLPRGRVYRYPPGRNLPDVGGMPFRDAAFSQPMQAGALATALAN
ATPEQQRTLLGENLYPLVDQLEHDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAME
VLRSVQQQQQVNNPTDHMASLSLND
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggttcaggtgcaaccgcagtctccggtttctgtcccaaatggggtggcaagc
aatggaatgaaccagttcatgtcgacctctttgtatgtaggggatcttgaccacaatgtg
accgaaactcagctctatgatttgtttaatcagctgggtcaggtcgtatcgattcgggta
tgcagggacttgaccagtagaagatctcttggttatggctatgtcaattatagcaacatc
catgatgcggcacgggcattggaggtgctgaacttcactcctgtcaatggcaagccaatt
aggataatgtactctcatcgtgaccctactattcgtaaaagtggtgctggaaatatatat
atcaagaatttggacaaggcaattgacaacaaagctctacatgacacattttccacattt
gggaatattttatcttgcaaagtagtaactgattctttgggtcagtctttaggatatggc
tttgtacaatttgataatgaagagtctgctaaaagcgcaattgataaattgaacggcatg
ctactgaatgacaaacaagtttatgttggacctttcctccgcaaacaggaaagagagtct
gctatagataagacaaaattcaataatgtttatgtaaagaatctatcagagacaacaact
gatgaagatttgaagaagatttttggtgaatatggaactattactagtgctgtagttatg
agggatggtgatggaaagtccaaatgttttggttttgtcaattttgagaatccagatgat
gcagctcgatctgttgtggctcttaatgaaaagacatttgatgataaggagtggtatgtt
gggaaagcacagaaaaaatctgaaagagaaattgaattaaaaggacagcttgagcaaact
ttgaaggagaaagttgacaaattcgaaggattgaatctatatgttaagaacctagatgat
agcatcactgacgataagctgaaggatctattctcagaatttggaacagttacttcatgc
aaggttatgcgtgacccaagtggtgtaagtagaggatcaggctttgttgccttctcaact
gctgaagaagcatctcgagctctcgcggagatgaatggtaaaatggtagttagcaaacca
ttgtatgttgcacttgcacaacggaaagaagaacgaagagcaaggttgcaggcacagttt
tcacaaatgcgttcttctgcaatggcacctgcagttggtcctcgtatgcctatctatcct
cctggaactccaggtattggacagcaactattctatgggcaaagccctcctgctatcctc
cctccccagcctgggtttgggtatcagcagcaactggttcctggaatgaggccaaatttt
ttcgttccaatggtccaaccaggtcagccggcccagcgcccaggaagccggagatttgga
gcagggccagtgcaacctcagcaaccgcttcccttgatgcagcagcagatgcttcctagg
ggccgtgtttatcgttacccccctggtcgcaacttgcctgatgtggggggaatgccattt
agagatgctgcattttcacagcctatgcaggctggggctttggccactgcccttgctaat
gcaacacctgaacaacagaggacgttgcttggggaaaatttgtatccacttgtggaccag
ttggagcatgataatgctgctaaggtgactggcatgcttctagagatggaccagactgag
gttttacacctgctggagtctccagaagccctgaaagctaaagttgctgaggccatggag
gtgcttagaagtgttcagcaacagcagcaggttaataatccaactgatcatatggcctcg
ctgtccctaaatgactaa
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