Hevea brasiliensis (rubber tree): 110644378
Help
Entry
110644378 CDS
T05150
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbr03016
]
110644378
Enzymes [BR:
hbr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
110644378
Transfer RNA biogenesis [BR:
hbr03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
110644378
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
VESA1_N
Motif
Other DBs
NCBI-GeneID:
110644378
NCBI-ProteinID:
XP_021652793
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MEDIEDLLIGSGGGVPPGFRLPLNSIGVIPWKNKNKSNLNASKVSQIPFSSKIPGTQTIY
IKTFGCSHNQSDSEYMAGQLSSFGYALTDIPEDADLWLINTCTVKSPSQSAMDTLLTKGK
RAKKPLVVAGCVPQGSRNLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPAL
DLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVGRVRTVIADGVKEIW
LSSEDTGAYGRDIGVNLPTLLNAIVAELPTDASAMLRIGMTNPPFILEHLKEIAEVLCHP
CVYSFLHVPVQSGSDSVLSAMNREYTVSEFRTVVDTLTELVPGMQIATDIICGFPGETDD
DFAQTVSLVAEYKFPQVHISQFYPRPGTPAARMKKVPSNIVKKRSRELTSVFEAFTPYNG
MEGRVERIWITEIATDGIHLVGHTKAYVQVLVVAPESMLGASAIVKITSVGRWSVFGEVI
QTLNQMDGKTVSAEKLPGKEKCSPCSDPCETCACSKESEPCDCGPESCGGQNALEESAIP
QNDMLLGDRNRRNLIGWFLRKRKNQMHRKLENGIAVGSMKKQEWTGGNSSMRSIVDRALV
GGMLVSLLTVVALLIHLSFRTISSK
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatagaagatttattgattggtagtggaggtggtgttcctcctggatttcgt
ctgcctctgaattccattggcgttattccctggaagaataagaacaaatctaacctcaat
gcatccaaggtctctcaaatccctttctcttccaaaattcctggcactcagaccatatat
atcaagacttttggatgctcacataatcagagtgacagtgaatatatggctggtcagctt
tcatcatttggttatgcattaactgacattcccgaggatgctgacttgtggctgatcaat
acatgcactgtaaaatctccaagtcagtctgcaatggacactctattaacaaagggcaaa
agggcaaaaaaacccctggtggttgctgggtgtgtgcctcaaggcagtcgaaatttgaaa
gaactagaaggagtcagtatagttggtgtccagcaaatagaccgtgtagttgaagttgtg
gaagagactctaaaaggtcatgaggtgcggcttttgaaccgcaagacattgcctgcgcta
gacttgcctaaggttcgtaagaacaagtttgttgagattcttccaattaatgttggttgt
ttgggtgcttgcacttattgcaagacaaagcatgcccgtggtcatctggggagctatact
gttgacagccttgtgggtcgtgtaagaacagttatagctgatggagtaaaagaaatatgg
ttgagcagtgaagatactggagcatatggtcgtgacattggggttaatcttccaacatta
ttaaatgctattgttgctgaacttcctactgatgcaagtgccatgcttcgaattgggatg
acaaatcctccttttatccttgagcacttgaaagagatagctgaagttttgtgtcaccca
tgtgtatactcttttcttcatgtgcctgtgcaatctgggagtgattcagttttgagtgca
atgaatcgagagtacacagtgagtgaattcaggactgtggtagataccttgactgaacta
gttccagggatgcaaattgctactgacataatatgtggattcccaggtgaaacagatgat
gattttgctcaaactgtcagtcttgttgcggagtacaaattccctcaagttcacatatca
cagttctatcctagaccagggacacctgctgccaggatgaagaaagtcccaagtaacata
gtgaagaaaaggagccgtgaattgacttccgtttttgaagctttcactccatataatgga
atggagggtagagtggaaagaatatggataactgaaatagcaactgatggaattcacttg
gttggccatacaaaggcatatgttcaggtgcttgtagttgctccagaaagcatgctgggt
gcttcagctattgttaagataacatctgtcggaaggtggtctgtttttggagaagtgatt
cagactctcaaccaaatggatggaaaaacggtttccgctgaaaaattgcctggtaaggaa
aaatgttctccctgctccgacccatgtgaaacttgtgcttgttcaaaggaatcagagcct
tgtgattgtggaccagaaagctgtggaggacagaatgctttggaagaaagtgccattcca
cagaatgatatgctactgggtgatcgaaatagaagaaatctgattggttggtttttaaga
aagcggaaaaatcaaatgcacaggaagttagagaatgggattgccgtgggatccatgaaa
aagcaagaatggaccggaggaaactcaagtatgcggagcattgtcgatagggctcttgta
ggaggcatgcttgtcagcttattgacagttgtagctctattaatacatcttagttttagg
actatttcatcgaagtga
DBGET
integrated database retrieval system
