Hevea brasiliensis (rubber tree): 110644600 Help Entry 110644600         CDS       T05150                                  Name (RefSeq) DNA repair helicase XPD   KO K10844   DNA excision repair protein ERCC-2 [EC:5.6.2.3] Organism hbr  Hevea brasiliensis (rubber tree) Pathway hbr03022   Basal transcription factors hbr03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:hbr00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     110644600   09124 Replication and repair    03420 Nucleotide excision repair     110644600  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:hbr03021]     110644600    03036 Chromosome and associated proteins [BR:hbr03036]     110644600    03400 DNA repair and recombination proteins [BR:hbr03400]     110644600 Enzymes [BR:hbr01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      110644600 Transcription machinery [BR:hbr03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIIH      110644600 Chromosome and associated proteins [BR:hbr03036]  Eukaryotic type   Centrosome formation proteins    Spindle formation proteins     110644600 DNA repair and recombination proteins [BR:hbr03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TFIIH complex      110644600 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD_2 Helicase_C_2 HBB ResIII DEAD SNF2-rel_dom NAMPT_N nSTAND3 AAA_11 Motif Other DBs NCBI-GeneID:  110644600 NCBI-ProteinID:  XP_021653155 LinkDB All DBs Position Unknown AA seq 758 aa AA seqDB search MKFQIEDVTVYFPYDNIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYS LSKPQSQVKLIYCTRTVHEMEKTLAELKLLHNYQIKHLGPAAGILAIGLSSRKNLCVNPT VLAAENRDSVDAACRKLTASWVRALAAENPNVPTCEFFENYERAASAAVLPPGVYTLQDL RAYGREKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID NVCIEALSVSVRSKTLDGASRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAQRGNLAA TDTWLANPALPDDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLDTENVEKESPINFVAS LNTHAGIDQKTLKFCYDRLHSLMLTLEITDTDEFLHIQTICDFATLVGTYSRGFSIIIEP FDERMPHIPDPVLQLSCHDASLAIKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS FTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSVVPDGIVCFFV SYSYMDGIINSWNETGVLKEIMQHKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVA RGKVAEGIDFDRHYGRLVIMFGIPFQYTLSKILIARLEYLRDTFQIKEGDFLTFDALRQA AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDANLNLSTDMALHIAREF LRKMAQPYDKTGTGGRKTLLSQEDLEKMAENGVQEMLF NT seq 2277 nt NT seq  +upstreamnt  +downstreamnt atgaagttccaaatcgaggacgtgactgtctacttcccgtacgataatatttatccggag caatactcttatatggtcgagctaaagcgtgccctggacgccaagggccactgcctcctg gaaatgcctacgggaactggaaagaccatagcgcttctatctttgatcaccagctactct ctttccaagccccagagccaagtgaagctaatctactgtacgcgcaccgtgcacgagatg gagaaaaccctcgccgagctcaaactgttgcacaattaccaaatcaagcatttgggacct gctgcggggattttggctatcggattgtcgtcgaggaagaatctctgcgtgaatccgacg gtattggccgcagagaatcgggattcggtggatgccgcttgtaggaagctgacggctagt tgggttagggctttggccgcagagaatcccaatgtaccgacttgtgagttttttgagaac tatgagagggcggcgtccgcagcagtattgccacctggagtttacacgcttcaggatctg agagcatatggtagggagaaagggtggtgtccatacttcttagcacggcatatggtgcag tttgcaaatgtggtggtttatagttaccaatacttgcttgatccaaaggtagctggaatt atatcgaaggaaatgcaaaaggaatctgtagtggtgtttgatgaggcacataatattgat aatgtctgtattgaagcacttagtgttagtgtgagaagcaagacacttgatggggcttcc agaaatctgtcaaggataaatcaggagattgagaggttcaaggccactgatgctggtaga ttgcgtgctgaatataaccggcttgttgagggtttggcacagcggggaaacctggctgcc acagatacatggcttgcaaaccctgccttgcctgatgatattctgaaggaggcagttcct ggcaatattcgtcgagcggagcattttctgcatgtcttacgtagattggttcaatacctg agagggcggttggatactgaaaatgttgagaaggaaagtcctattaactttgttgcctct ttaaatacccatgctggaattgaccagaaaacattgaagttttgttatgatcgcctacac tcacttatgctgacactggaaataacggacacagatgagttcttacatatccaaacaata tgtgactttgcaacacttgtggggacatatagtcgtggattttccatcataattgaacct tttgatgagagaatgccacatattcctgaccctgtattgcagcttagctgccatgatgct tctcttgccataaagccagtatttgataggttccagtcagttgtgattacttctggaacg ctgagccctattgacctctaccctcgtcttcttaacttccatcctgttgtcagtcgaagc tttacaatgtccttgacaagagattgcatatgccctatggttctcactcgtggaagtgac caacttccagtaagtaccaaatttgatatgagaagtgatccaggtgttgcaagaaactat gggaagctgttggtggagatggtatctgttgttccagatggaattgtatgcttttttgtc agttactcttacatggatggaattatcaacagctggaatgaaactggagttcttaaggaa ataatgcaacataagcttgtatttattgagacccaagatgtggtagaaactacattggct cttgacaactatcgcagggcttgtgattgtgggagaggtgcagtctttttctccgttgcc aggggaaaagtagccgaaggaatagactttgatcgacactatggtagattagtgatcatg tttggtattcctttccaatataccttaagcaaaatattaattgcacggttggagtatcta cgggacacatttcaaataaaggagggcgatttcctaacatttgatgccttgagacaagct gctcaatgtgtgggccgagtgatcaggtcaaaggctgattatggaatgatgatatttgct gataaaagatatagccgtcatgacaagcgctcaaaattgcctggttggatactgtcgcat ttacgtgatgcaaacttgaatttgagcactgacatggctttgcatattgcacgcgagttt ctcaggaagatggctcaaccatatgataaaacaggcactggcggtaggaaaacattgctg tcacaggaagacctggagaagatggctgaaaatggagtacaagagatgttgttttaa

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