Hevea brasiliensis (rubber tree): 110645559
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Entry
110645559 CDS
T05150
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hbr03009
]
110645559
Enzymes [BR:
hbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110645559
Ribosome biogenesis [BR:
hbr03009
]
Eukaryotic type
Pre-60S particles
Helicases
110645559
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
110645559
NCBI-ProteinID:
XP_021654458
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MDITDSLYPNRALTETRFSDLKPSLSEPVLEALTLAGFEYCTPVQAATIPLLCSYKDVAV
DATTGSGKTLAFVVPLVEILRRASSPPKPHQVMGIILSPTRELSSQIYNVAQPFIATLSN
VKSILLVGGVDVKADLKKIEEEGANLLIGTPGRLYDIMERVDFLDFRNLEVLILDEADRL
LDMGFQKQINSIISHLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRAETKSLNESA
SSQLASSKTPSGLQLEYLECEADNKPSQLVDLLIKNKSKKIIIYFMTCACVDYWGVLLPR
LTALKGFSLIPLHGKMKQTAREKALASFTSLTNGILLCTDVAARGLDIPGVDCIVQYDPP
QDPNVFIHRVGRTARLGRQGSAIVFLLPKEEAYVEFLHIRRVPLQKKEGSDDAPDVVPQI
RSAAKKDRDVMEKGLRAFVSFIRAYKEHHCSYIFRWKELEVGKLGMGYGLLQLPSMPEVK
HHSLSTIGFTPVEDLKLEDIKYKDKSREKQRKRNLQVKKEAQQQEPKPQKPNKAPNAAPT
VMRKKTAKQRRAAQTIEDEDELAREYRLLKKLKKGTIDESEFAKLTGTEELL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggacatcaccgattcgctgtatccaaatagagcgttaacggaaacgcgcttctccgat
ctaaaaccgtcactctcagagcctgttctcgaagctctaactctagcaggtttcgaatat
tgcacgccggtccaagcagccacgattccgctactatgcagctacaaggatgttgcagtc
gacgccacaaccggctctggaaaaacccttgctttcgtagtcccccttgtcgagattctc
cgtcgagcctcctctcctcccaaaccccaccaggtgatgggaataattctctctcctact
agggagttgtcatcacaaatatataacgttgctcaacctttcattgcaactttatcgaat
gttaagtcgattctccttgttggcggggtggatgtgaaagctgatttgaagaaaatagag
gaggaaggagctaatttattgattggaacgcctggaaggctttatgacatcatggaacgt
gtggatttcctggactttcgaaaccttgaggttttaatcttggatgaggctgatcgactc
ttggatatgggattccaaaagcagataaattccattatatctcacttacccaagcttcgc
aggactggtcttttctcagctactcaaactgaggcagttgaagagttggccaaagctgga
ctgaggaatcctgtgagggttgaagttcgagcagaaaccaaatcactgaatgaatcagca
tcttcgcaattagcttcttcaaaaacaccttcaggccttcaacttgagtatttggaatgc
gaagcagataataaaccgtctcagcttgttgatctccttattaagaacaagtcaaaaaag
attataatatactttatgacttgtgcgtgtgttgattattggggtgttcttcttccacgt
cttactgctttaaagggcttctctttgattcctcttcatgggaagatgaagcagactgca
agagagaaagcattggcttcatttacatctctcacaaatggcattcttctatgtacggat
gttgcagcacgtggacttgatattccaggtgttgattgtatagtgcagtatgatcctcct
caggatccaaacgttttcattcacagagttggccgaactgctcggttgggtagacaagga
agcgctatcgttttccttttgccaaaggaggaagcttatgtggaatttctgcatataaga
agggttcctcttcaaaagaaggaaggttcagatgacgctcctgatgttgttcctcagata
cggtctgctgccaagaaggaccgagatgtcatggagaagggactgagagcatttgtttca
tttatccgtgcatataaagagcatcattgctcgtacattttcagatggaaagaacttgaa
gttgggaagttgggcatgggatatggcttattgcagcttccttcaatgcctgaggtaaag
caccactcactttcaaccattggttttactccagttgaagacctcaaattggaggacatc
aaatacaaggataaatctcgggagaaacaaaggaagaggaatttgcaagtgaagaaagaa
gcacaacagcaagaaccaaaacctcagaagcccaacaaggcccccaatgctgccccaacg
gttatgaggaaaaaaacagctaagcagagacgggctgcccagacaattgaagatgaagat
gaattagcgagggaatatcgattactgaaaaagctaaagaaggggaccatcgatgaaagt
gaatttgcaaagttaactggaactgaagaattactataa
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